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View Structure Prediction Details

Protein: GAUT5_ARATH
Organism: Arabidopsis thaliana
Length: 610 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GAUT5_ARATH.

Description E-value Query
Range
Subject
Range
GAUT1_ARATH - Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana GN=GAUT1 PE=1 SV=1
332.0 [0..98] [610..142]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQVRRWQRI LILSLLLLSV LAPIVFVSNR LKSITSVDRG EFIEELSDIT DKTEDELRLT  60
   61 AIEQDEEGLK EPKRILQDRD FNSVVLSNSS DKSNDTVQSN EGDQKNFLSE VDKGNNHKPK 120
  121 EEQAVSQKTT VSSNAEVKIS ARDIQLNHKT EFRPPSSKSE KNTRVQLERA TDERVKEIRD 180
  181 KIIQAKAYLN LALPGNNSQI VKELRVRTKE LERATGDTTK DKYLPKSSPN RLKAMEVALY 240
  241 KVSRAFHNCP AIATKLQAMT YKTEEQARAQ KKQAAYLMQL AARTTPKGLH CLSMRLTTEY 300
  301 FTLDHEKRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.522879
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [310-610]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLQQSYNDPD LYHYVVFSDN VLASSVVVNS TISSSKEPDK IVFHVVTDSL NYPAISMWFL  60
   61 LNPSGRASIQ ILNIDEMNVL PLYHAELLMK QNSSDPRIIS ALNHARFYLP DIFPGLNKIV 120
  121 LFDHDVVVQR DLTRLWSLDM TGKVVGAVET CLEGDPSYRS MDSFINFSDA WVSQKFDPKA 180
  181 CTWAFGMNLF DLEEWRRQEL TSVYLKYFDL GVKGHLWKAG GLPVGWLTFF GQTFPLEKRW 240
  241 NVGGLGHESG LRASDIEQAA VIHYDGIMKP WLDIGIDKYK RYWNIHVPYH HPHLQRCNIH 300
  301 D

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 42.045757
Match: 1g9rA
Description: Galactosyltransferase LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle