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View Structure Prediction Details

Protein: COPT6_ARATH
Organism: Arabidopsis thaliana
Length: 145 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COPT6_ARATH.

Description E-value Query
Range
Subject
Range
gi|786136 - gi|786136|gb|AAA99499.1| polymorphic immunodominant molecule [Theileria parva]
132.0 [0..5] [145..390]

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Predicted Domain #1
Region A:
Residues: [1-145]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDHGNMPPSS PSSMVNHTNS NMIMMHMTFF WGKNTEILFS GWPGTSLGMY VLCLIVVFLL  60
   61 AVIVEWLAHS SILRGRGSTS RAKGLVQTAV YTLKTGLAYL VMLAVMSFNG GVFIVAIAGF 120
  121 AVGFMLFGST AFKNPSDDEK PFEQL

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 43.259637
Match: PF04145.6
Description: No description for PF04145.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle