| Protein: | PME13_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 614 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PME13_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
624.0 | [0..1] | [614..1] |
|
Region A: Residues: [1-92] |
1 11 21 31 41 51
| | | | | |
1 MAFQDFDKIQ ERVNANRKRK FRKRIIVGTV SLLVVVAAIV GGAFAYVAYE KRNEQQQQQQ 60
61 QAKNHNKSGS GNNVVKDSDK KSPSPPTPSQ KA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [93-277] |
1 11 21 31 41 51
| | | | | |
1 PVSAAQSVKP GQGDKIIQTL CSSTLYMQIC EKTLKNRTDK GFALDNPTTF LKSAIEAVNE 60
61 DLDLVLEKVL SLKTENQDDK DAIEQCKLLV EDAKEETVAS LNKINVTEVN SFEKVVPDLE 120
121 SWLSAVMSYQ ETCLDGFEEG NLKSEVKTSV NSSQVLTSNS LALIKTFTEN LSPVMKVVER 180
181 HLLDD
|
| Detection Method: | |
| Confidence: | 21.522879 |
| Match: | 1xg2B |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [278-614] |
1 11 21 31 41 51
| | | | | |
1 IPSWVSNDDR RMLRAVDVKA LKPNATVAKD GSGDFTTIND ALRAMPEKYE GRYIIYVKQG 60
61 IYDEYVTVDK KKANLTMVGD GSQKTIVTGN KSHAKKIRTF LTATFVAQGE GFMAQSMGFR 120
121 NTAGPEGHQA VAIRVQSDRS IFLNCRFEGY QDTLYAYTHR QYYRSCVIVG TIDFIFGDAA 180
181 AIFQNCNIFI RKGLPGQKNT VTAQGRVDKF QTTGFVVHNC KIAANEDLKP VKEEYKSYLG 240
241 RPWKNYSRTI IMESKIENVI DPVGWLRWQE TDFAIDTLYY AEYNNKGSSG DTTSRVKWPG 300
301 FKVINKEEAL NYTVGPFLQG DWISASGSPV KLGLYDA
|
| Detection Method: | |
| Confidence: | 101.0 |
| Match: | 1xg2A |
| Description: | Crystal structure of the complex between pectin methylesterase and its inhibitor protein |
| Matching Structure (courtesy of the PDB): |
|
