YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|15320408, gi|...
Organism: Arabidopsis thaliana
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15320408, gi|....

Description E-value Query
Range
Subject
Range
Y531_METJA - Uncharacterized protein MJ0531 OS=Methanocaldococcus jannaschii GN=MJ0531 PE=3 SV=1
Y531_METJA - Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL...
138.0 [0..33] [177..20]

Back

Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALPEDEEY SFREVVLPSL IPVVPEPELE RESGERRRGR DVIVAVDHGP NSKHAFDWAL  60
   61 VHFCRLADTL HLVHAVSSSF SLQCVKNDVV YETSQALMEK LAVEAYQVAM VKSVARVVEG 120
  121 DAGKVICKEA EKVKPAAVIV GTRGRSLVRS VLQGSVSEYC FHNCKSAPVI IVPGKEAGDE 180
  181 SIVDWTRSED PKP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 23.09691
Match: 1mjhA
Description: "Hypothetical" protein MJ0577
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.298809327772818 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle