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View Structure Prediction Details

Protein: DIR23_ARATH
Organism: Arabidopsis thaliana
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIR23_ARATH.

Description E-value Query
Range
Subject
Range
gi|4803933, gi|2... - gi|4803933|gb|AAD29806.1| putative disease resistance response protein [Arabidopsis thaliana], pir||...
236.0 [0..1] [182..1]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKEEYVSRM LVMLIMIMPL VAQGSRLHSW ANRLEETGKD KVTNLQFYFH DTLSGKNPTA  60
   61 VKVAQGTDTE KSPTLFGAVF MVDDALTETA DPKSKLVGRA QGLYGSSCKE EVGLIMAMSF 120
  121 CFEDGPYKDS TISMIGKNSA MNPIREMPIV GGTGMFRMAR GYAIARTNWF DPKTGDAIVG 180
  181 YNVTIMH

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.18
Match: 1z8kA
Description: X-ray structure of allene oxide cyclase from Arabidopsis thaliana at3g25770
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle