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View Structure Prediction Details

Protein: HPT1_ARATH
Organism: Arabidopsis thaliana
Length: 393 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HPT1_ARATH.

Description E-value Query
Range
Subject
Range
CHLG_ARATH - Chlorophyll synthase, chloroplastic OS=Arabidopsis thaliana GN=CHLG PE=2 SV=1
190.0 [0..26] [385..5]

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Predicted Domain #1
Region A:
Residues: [1-262]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESLLSSSSL VSAAGGFCWK KQNLKLHSLS EIRVLRCDSS KVVAKPKFRN NLVRPDGQGS  60
   61 SLLLYPKHKS RFRVNATAGQ PEAFDSNSKQ KSFRDSLDAF YRFSRPHTVI GTVLSILSVS 120
  121 FLAVEKVSDI SPLLFTGILE AVVAALMMNI YIVGLNQLSD VEIDKVNKPY LPLASGEYSV 180
  181 NTGIAIVASF SIMSFWLGWI VGSWPLFWAL FVSFMLGTAY SINLPLLRWK RFALVAAMCI 240
  241 LAVRAIIVQI AFYLHIQTHV FG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [263-393]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RPILFTRPLI FATAFMSFFS VVIALFKDIP DIEGDKIFGI RSFSVTLGQK RVFWTCVTLL  60
   61 QMAYAVAILV GATSPFIWSK VISVVGHVIL ATTLWARAKS VDLSSKTEIT SCYMFIWKLF 120
  121 YAEYLLLPFL K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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