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View Structure Prediction Details

Protein: TLP2_ARATH
Organism: Arabidopsis thaliana
Length: 394 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TLP2_ARATH.

Description E-value Query
Range
Subject
Range
gi|30793997 - gi|30793997|gb|AAP40448.1| putative F-box containing tubby family protein [Arabidopsis thaliana]
613.0 [0..1] [394..1]

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Predicted Domain #1
Region A:
Residues: [1-100]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKSILRDL KEVRDGLGGI SKRSWSKSSH IAPDQTTPPL DNIPQSPWAS LPPELLHDII  60
   61 WRVEESETAW PARAAVVSCA SVCKSWRGIT MEIVRIPEQC 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.77
Match: 2e31A
Description: No description for 2e31A was found.

Predicted Domain #2
Region A:
Residues: [101-394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKLTFPISLK QPGPRDSPIQ CFIKRNRATA TYILYYGLMP SETENDKLLL AARRIRRATC  60
   61 TDFIISLSAK NFSRSSSTYV GKLRSGFLGT KFTIYDNQTA SSTAQAQPNR RLHPKQAAPK 120
  121 LPTNSSTVGN ITYELNVLRT RGPRRMHCAM DSIPLSSVIA EPSVVQGIEE EVSSSPSPKG 180
  181 ETITTDKEIP DNSPSLRDQP LVLKNKSPRW HEQLQCWCLN FKGRVTVASV KNFQLVAEID 240
  241 ASLDAPPEEH ERVILQFGKI GKDIFTMDYR YPLSAFQAFA ICISSFDTKP ACEG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 107.0
Match: 1c8zA
Description: Transcriptional factor tubby, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle