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View Structure Prediction Details

Protein: unc-93
Organism: Caenorhabditis elegans
Length: 700 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-93.

Description E-value Query
Range
Subject
Range
unc-93 - UNC-93 protein status:Partially_confirmed UniProt:Q93380 protein_id:CAI70399.1
565.0 [0..1] [700..6]

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Predicted Domain #1
Region A:
Residues: [1-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDSNTWDLV GEQQQRKKSR SPSRASRVDS ELLVGVENAA ELEALGLGKE QLEEEARRHK  60
   61 KQRSKSPALE NIRKTSIHLL QKFGAIPKKK DDSVLLFRFH DIPDIPLESL CIRPKEFFEE 120
  121 PKVFSFRDMG REQQKAEVNE KCSYLFRGTS FDHDDHFELP TETGRVPEYD HFCPIHGSRR 180
  181 RLPRNKLVTM QTLMHSVDDE DNEDLAYIYG HDFLAKLVRK KKRE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [225-700]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSGTEKERA NKIKRKIMSN LWILSVAFLF LFTAFNGLQN LQTSVNGDLG SDSLVALYLS  60
   61 LAISSLFVPS FMINRLGCKL TFLIAIFVYF LYIVINLRPT YSSMIPASIF CGIAASCIWG 120
  121 AKCAYITEMG IRYASLNFES QTTVIVRFFG YFFMIVHCGQ VVGNMVSSYI FTLSYSQALR 180
  181 GPEDSIYDSC GYQFPKNLSD LTELAESNLA RPPQKVYVAV CLAYLACVII SGMIMSMFLN 240
  241 ALAKDARNRK MAQKFNSEIF YLMLKHLINI KFMLLVPLTI FNGLEQAFLV GVYTKAFVGC 300
  301 GLGIWQIGFV MACFGISDAV CSLVFGPLIK LFGRMPLFVF GAVVNLLMIV TLMVWPLNAA 360
  361 DTQIFYVVAA MWGMADGVWN TQINGFWVAL VGRQSLQFAF TKYRFWESLG IAIGFALIRH 420
  421 VTVEIYLLIT FFMLLLGMCG FLAIENFDHI IKFWHHLIHT SCPEKEPLDD RNSDFE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 35.221849
Match: 1pw4A
Description: Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transporter activity 4.09176719149278 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle