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View Structure Prediction Details

Protein: MYO5_ARATH
Organism: Arabidopsis thaliana
Length: 1520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for MYO5_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1051]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPVIIVGS HVWVEDPHLA WIDGEVTRID GINVHVKTKK GKTVVTNVYF PKDTEAPSGG  60
   61 VDDMTKLSYL HEPGVLRNLE TRYELNEIYT YTGNILIAVN PFQRLPHIYE TDMMEQYKGI 120
  121 ALGELSPHVF AIGDAAYRAM INEGKNNSIL VSGESGAGKT ETTKMLMRYL AFLGGRSGVE 180
  181 GRTVEQQVLE SNPVLEAFGN AKTLRNNNSS RFGKFVEIQF DKNGRISGAA IRTYLLERSR 240
  241 VCQISDPERN YHCFYLLCAA PPEDIKKYKL ENPHKFHYLN QSSCYKLDGV DDASEYLETR 300
  301 RAMDVVGISN EEQEAIFRVV AAILHLGNID FGKGEEIDSS VIKDKDSRSH LNMAAELLMC 360
  361 NAQSLEDALI RRVMVTPEEI ITRTLDPDNA IASRDTLAKT IYSHLFDWIV NKINTSIGQD 420
  421 PRSKSIIGVL DIYGFESFKC NSFEQFCINF TNEKLQQHFN QHVFKMEQEE YTKEEIAWSY 480
  481 IEFIDNQDVL ELIEKKPGGI ISLLDEACMF PKSTHETFSQ KLFQTFKEHE RFAKPKLSRT 540
  541 DFTISHYAGE VTYQSNHFID KNKDYIVAEH QALFTASNCK FVAGLFHALH EDSSRSSKFS 600
  601 SIGSRFKQQL HSLMESLNGT EPHYIRCIKP NNVLKPGIFE NFNVIHQLRC GGVLEAIRIS 660
  661 CAGYPTRLAF YDFLDRFGLL APEVLEGNYD DKVACQMILD KKSLTDYQIG KTKIFLRAGQ 720
  721 MAELDARRAE VLGNAARVIQ RQFRTCMARK NYRSIRNAAI VLQSFLRGEI ARAVHKKLRI 780
  781 EAAALRVQKN FRRYVDRKSF VTTRSSTIVL QTGLRAMIAR SEFRLRRQRK AAIVLQAHWR 840
  841 GRQAFSYYTR LQKAAIVTQC AWRCRLARRE LRMLKMAARD TGALKDAKNK LEQRVEELSL 900
  901 RLHLEKRLRT DLEEAKVQEV AKLQEALHTM RLQLKETTAM VVKEQEAARV AIEEASSVNK 960
  961 EPVVVEDTEK IDSLSNEIDR LKGLLSSETH KADEAQHAYQ SALVQNEELC KKLEEAGRKI1020
 1021 DQLQDSVQRF QEKVFSLESE NKVLRQQTLT I

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [1052-1365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SPTTRALALR PKTTIIQRTP EKDTFSNGET TQLQEPETED RPQKSLNQKQ QENQELLLKS  60
   61 ISEDIGFSEG KPVAACLIYK CLIHWRSFEV ERTSIFNRII ETIASAIEMQ ENSDVLCYWL 120
  121 SNSATLLMFL QRTLKAGATG SITTPRRRGM PSSLFGRVSQ SFRGSPQSAG FPFMTGRAIG 180
  181 GGLDELRQVE AKYPALLFKQ QLTAFLEKIY GMIRDKMKKE ISPLLASCIQ VPRTPRSGLV 240
  241 KGRSQNTQNN VVAPKPMIAH WQNIVTCLNG HLRTMRANYV PSLLISKVFG QIFSFINVQL 300
  301 FNSLLLRREC CSFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2i1jA
Description: No description for 2i1jA was found.

Predicted Domain #3
Region A:
Residues: [1366-1520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGEYVKTGLA ELEKWCHDAT EEFVGSAWDE LKHIRQAVGF LVIHQKPKKS LKEITTELCP  60
   61 VLSIQQLYRI STMYWDDKYG THSVSTEVIA TMRAEVSDVS KSAISNSFLL DDDSSIPFSL 120
  121 DDISKSMQNV EVAEVDPPPL IRQNSNFMFL LERSD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.69897
Match: 1dg3A
Description: Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle