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View Structure Prediction Details

Protein: GDL13_ARATH
Organism: Arabidopsis thaliana
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL13_ARATH.

Description E-value Query
Range
Subject
Range
GDL6_ARATH - GDSL esterase/lipase At1g28570 OS=Arabidopsis thaliana GN=At1g28570 PE=2 SV=1
390.0 [0..1] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSLKKLIS SFLLVLYSTT IIVASSESRC RRFKSIISFG DSIADTGNYL HLSDVNHLPQ  60
   61 SAFLPYGESF FHPPSGRASN GRLIIDFIAE FLGLPYVPPY FGSQNVSFEQ GINFAVYGAT 120
  121 ALDRAFLLGK GIESDFTNVS LSVQLDTFKQ ILPNLCASST RDCKEMLGDS LILMGEIGGN 180
  181 DYNYPFFEGK SINEIKELVP LIVKAISSAI VDLIDLGGKT FLVPGGFPTG CSAAYLTLFQ 240
  241 TVAEKDQDPL TGCYPLLNEF GEHHNEQLKT ELKRLQKFYP HVNIIYADYH NSLYRFYQEP 300
  301 AKYGFKNKPL AACCGVGGKY NFTIGKECGY EGVNYCQNPS EYVNWDGYHL TEAAYQKMTE 360
  361 GILNGPYATP AFDWSCLGSG TVDT

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.21
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle