YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|33866840, gi|...
Organism: Synechococcus sp. WH 8102
Length: 85 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|33866840, gi|....

Description E-value Query
Range
Subject
Range
gi|56676735, gi|... - gi|56694998|ref|YP_165344.1| glutaredoxin [Ruegeria pomeroyi DSS-3], gi|56676735|gb|AAV93401.1| glut...
130.0 [0..1] [85..1]

Back

Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVEIYTWR TCPFCVRAKG LLDRKGVSYT EHAVDGDEPG RDAMAARGDG RRSVPQIFID  60
   61 DRHIGGCDDL HALERSGELD PLLNA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1fovA
Description: Glutaredoxin (Grx, thioltransferase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.142133664747919 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle