| Protein: | RL23_SYNPX |
| Organism: | Synechococcus sp. WH 8102 |
| Length: | 100 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL23_SYNPX.
| Description | E-value | Query Range |
Subject Range |
|
|
139.0 | [0..2] | [93..276] |
|
Region A: Residues: [1-100] |
1 11 21 31 41 51
| | | | | |
1 MTERFQGRLA DVIRRPLITE KATRALEFNQ YTFEVDHRAA KPDIKAAIEQ LFDVKVTGIS 60
61 TMNPPRRTRR MGRFAGKRAQ VKKAVVRLAE GNSIQLFPES
|
| Detection Method: |  |
| Confidence: | 27.522879 |
| Match: | 1nkwR |
| Description: | 50S subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 9.49719655437057 | bayes_pls_golite062009 |
| structural molecule activity | 8.91971353502188 | bayes_pls_golite062009 |
| RNA binding | 2.08123706428867 | bayes_pls_golite062009 |
| binding | 1.25515792429002 | bayes_pls_golite062009 |
| nucleic acid binding | 0.975441164470499 | bayes_pls_golite062009 |
| protein binding | 0.535333601277892 | bayes_pls_golite062009 |
