| Protein: | PTG3C_BACSU |
| Organism: | Bacillus subtilis subsp. subtilis str. 168 |
| Length: | 699 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTG3C_BACSU.
| Description | E-value | Query Range |
Subject Range |
|
|
527.0 | [0..1] | [699..1] |
|
Region A: Residues: [1-168] |
1 11 21 31 41 51
| | | | | |
1 MFKALFGVLQ KIGRALMLPV AILPAAGILL AIGNAMQNKD MIQVLHFLSN DNVQLVAGVM 60
61 ESAGQIVFDN LPLLFAVGVA IGLANGDGVA GIAAIIGYLV MNVSMSAVLL ANGTIPSDSV 120
121 ERAKFFTENH PAYVNMLGIP TLATGVFGGI IVGVLAALLF NRFYTIEL
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [169-423] |
1 11 21 31 41 51
| | | | | |
1 PQYLGFFAGK RFVPIVTSIS ALILGLIMLV IWPPIQHGLN AFSTGLVEAN PTLAAFIFGV 60
61 IERSLIPFGL HHIFYSPFWY EFFSYKSAAG EIIRGDQRIF MAQIKDGVQL TAGTFMTGKY 120
121 PFMMFGLPAA ALAIYHEAKP QNKKLVAGIM GSAALTSFLT GITEPLEFSF LFVAPVLFAI 180
181 HCLFAGLSFM VMQLLNVKIG MTFSGGLIDY FLFGILPNRT AWWLVIPVGL GLAVIYYFGF 240
241 RFAIRKFNLK TPGRE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [424-529] |
1 11 21 31 41 51
| | | | | |
1 DAAEETAAPG KTGEAGDLPY EILQAMGDQE NIKHLDACIT RLRVTVNDQK KVDKDRLKQL 60
61 GASGVLEVGN NIQAIFGPRS DGLKTQMQDI IAGRKPRPEP KTSAQE
|
| Detection Method: | |
| Confidence: | 14.0 |
| Match: | 1o2fB |
| Description: | Glucose permease domain IIB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.31090449546064 | bayes_pls_golite062009 |
| protein binding | 0.476896736636797 | bayes_pls_golite062009 |
|
Region A: Residues: [530-699] |
1 11 21 31 41 51
| | | | | |
1 EVGQQVEEVI AEPLQNEIGE EVFVSPITGE IHPITDVPDQ VFSGKMMGDG FAILPSEGIV 60
61 VSPVRGKILN VFPTKHAIGL QSDGGREILI HFGIDTVSLK GEGFTSFVSE GDRVEPGQKL 120
121 LEVDLDAVKP NVPSLMTPIV FTNLAEGETV SIKASGSVNR EQEDIVKIEK
|
| Detection Method: | |
| Confidence: | 43.0 |
| Match: | 1ax3A |
| Description: | SOLUTION NMR STRUCTURE OF B. SUBTILIS IIAGLC, 16 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| carbohydrate transmembrane transporter activity | 2.13836390376928 | bayes_pls_golite062009 |
| binding | 1.28730362877885 | bayes_pls_golite062009 |
| transporter activity | 0.711149297585691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 0.517650155593165 | bayes_pls_golite062009 |
| protein binding | 0.445041376423941 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.276105437109391 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.243355624712309 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.113736784801445 | bayes_pls_golite062009 |
