YRC Public Data Repository - Protein Structure Prediction

Protein:	NDUAC_PANTR
Organism:	Pan troglodytes
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUAC_PANTR.

Description	E-value	Query Range	Subject Range
NDUAC_BOVIN - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Bos taurus GN=NDUFA12 PE=1 SV=1 gi\|222092839, gi... - gi\|223633908\|ref\|NP_001138660.1\| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Ovis aries]...	216.0	[0..1]	[145..1]
gi\|57096775 - gi\|57096775\|ref\|XP_532652.1\| PREDICTED: similar to 13kDa differentiation-associated protein [Canis f...	214.0	[0..1]	[145..1]
gi\|30585307, gi\|... - gi\|60653625\|gb\|AAX29506.1\| 13kDa differentiation-associated protein [synthetic construct], gi\|606536...	213.0	[0..1]	[145..1]
gi\|30583279, gi\|... - gi\|30583279\|gb\|AAP35884.1\| 13kDa differentiation-associated protein [Homo sapiens], gi\|13543559\|gb\|A... gi\|61361471, gi\|... - gi\|61361471\|gb\|AAX42053.1\| 13kDa differentiation-associated protein [synthetic construct], gi\|613614...	212.0	[0..1]	[145..1]
gi\|111662467 - gi\|111662467\|gb\|ABH12257.1\| mitochondrial complex I subunit DAP13 [Gorilla gorilla] NDUAC_GORGO - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla gorilla GN=NDUFA12 ...	212.0	[0..1]	[145..1]
gi\|109481873, gi... - gi\|164565371\|ref\|NP_001100251.2\| NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12 [Rattus norv...	211.0	[0..1]	[145..1]
NDUAC_PONPY - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus GN=NDUFA12 PE=2 SV=1 NDUAC_PONAB - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo abelii GN=NDUFA12 PE=2 SV=1	209.0	[0..1]	[145..1]
gi\|26369247, gi\|... - gi\|27228985\|ref\|NP_079827.2\| 13kDa differentiation-associated protein [Mus musculus], gi\|26369247\|db...	208.0	[0..1]	[145..5]

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Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELVQVLKRG LQQITGHGGL RGYLRVFFRT NDAKVGTLVG EDKYGNKYYE DNKQFFGRHR  60
   61 WVVYTTEMNG KNTFWDVDGS MVPPEWHRWL HSMTDDPPTT KPLTARKFIW TNHKFNVTGT 120
  121 PEQYVPYSTT RKKIQEWIPP STPYK

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	62.886057
Match:	PF05071.7
Description:	No description for PF05071.7 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits