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View Structure Prediction Details

Protein: OTC_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 319 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OTC_BACSU.

Description E-value Query
Range
Subject
Range
OTC_PYRAB - Ornithine carbamoyltransferase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=argF PE=3 SV=4
OTC_PYRAB - Ornithine carbamoyltransferase OS=Pyrococcus abyssi GN=argF PE=3 SV=4
445.0 [0..8] [314..4]

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Predicted Domain #1
Region A:
Residues: [1-319]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHTVTQTSLY GKDLLTLKDL SEEDINALLA EAGELKQNKI QPIFHGKTLA MIFEKSSTRT  60
   61 RVSFEAGMAQ LGGSALFLSQ KDLQLGRGET VADTAKVLSG YVDAIMIRTF EHEKVEELAK 120
  121 EADIPVINGL TDKYHPCQAL ADLLTIKEIK GKLKGVKVAY IGDGNNVAHS LMIGCAKMGC 180
  181 DISIASPKGY EVLDEAAEAA KTYALQSGSS VTLTDDPIEA VKDADVIYSD VFTSMGQEAE 240
  241 EQERLAVFAP YQVNAALVSH AKPDYTFLHC LPAHREEEVT AEIIDGPNSA VFQQAENRLH 300
  301 VQKALLKAIL YKGESSKNC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 125.0
Match: 1a1sA
Description: ORNITHINE CARBAMOYLTRANSFERASE FROM PYROCOCCUS FURIOSUS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ornithine carbamoyltransferase activity 6.08861672645671 bayes_pls_golite062009
carboxyl- or carbamoyltransferase activity 5.32518877756022 bayes_pls_golite062009
aspartate carbamoyltransferase activity 3.84118892938517 bayes_pls_golite062009
transferase activity 2.2887439598954 bayes_pls_golite062009
carbamoyl-phosphate synthase activity 2.21516900257798 bayes_pls_golite062009
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity 2.19154218663721 bayes_pls_golite062009
catalytic activity 2.06069688716378 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 1.54712264845123 bayes_pls_golite062009
binding 1.00470116390248 bayes_pls_golite062009
dihydroorotase activity 0.585784960037124 bayes_pls_golite062009
protein binding 0.171217252293449 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle