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View Structure Prediction Details

Protein: CWLA_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 272 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CWLA_BACSU.

Description E-value Query
Range
Subject
Range
gi|221322618 - gi|221322618|ref|ZP_03603912.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtili...
gi|221318345 - gi|221318345|ref|ZP_03599639.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtili...
gi|221313422 - gi|221313422|ref|ZP_03595227.1| N-acetylmuramoyl-L-alanine amidase [Bacillus subtilis subsp. subtili...
XLYB_BACSU - N-acetylmuramoyl-L-alanine amidase XlyB OS=Bacillus subtilis GN=xlyB PE=3 SV=1
XLYB_BACSU - N-acetylmuramoyl-L-alanine amidase XlyB OS=Bacillus subtilis (strain 168) GN=xlyB PE=3 SV=1
157.0 [0..1] [271..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIKVVKNLV SKSKYGLKCP NPMKAEYITI HNTANDASAA NEISYMKNNS SSTSFHFAVD  60
   61 DKQVIQGIPT NRNAWHTGDG TNGTGNRKSI GVEICYSKSG GVRYKAAEKL AIKFVAQLLK 120
  121 ERGWGIDRVR KHQDWNGKYC PHRILSEGRW IQVKTAIEAE LK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.0
Match: 1yb0A
Description: Structure of PlyL
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.09849742457731 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [163-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLGGKTNSSK ASVAKKKTTN TSSKKTSYAL PSGIFKVKSP MMRGEKVTQI QKALAALYFY  60
   61 PDKGAKNNGI DGVYGPKTAD AIRRFQSMYG LTQDGIYGPK TKAKLEALLK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.85
Match: 1lbuA
Description: HYDROLASE METALLO (ZN) DD-PEPTIDASE
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
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