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View Structure Prediction Details

Protein: GLYG_RABIT
Organism: Oryctolagus cuniculus
Length: 333 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLYG_RABIT.

Description E-value Query
Range
Subject
Range
gi|66361459, gi|... - gi|66361471|pdb|1ZDF|A Chain A, Ser162 Mutant Of Glycogenin Complexed With Udp-Glucose And Manganese...
365.0 [0..1] [333..21]
GLYG_MOUSE - Glycogenin-1 OS=Mus musculus GN=Gyg1 PE=1 SV=3
361.0 [0..1] [333..1]
gi|114052881, gi... - gi|88954425|gb|AAI14102.1| Glycogenin 1 [Bos taurus], gi|114052881|ref|NP_001039332.1| glycogenin 1 ...
361.0 [0..1] [333..1]
gi|73990696 - gi|73990696|ref|XP_854393.1| PREDICTED: similar to Glycogenin-1 [Canis familiaris]
356.0 [0..1] [333..1]
gi|119599301, gi... - gi|976400|gb|AAB09752.1| glycogenin [Homo sapiens], gi|49168578|emb|CAG38784.1| GYG [Homo sapiens], ...
354.0 [0..1] [333..1]
GLYG_RAT - Glycogenin-1 OS=Rattus norvegicus GN=Gyg1 PE=2 SV=4
354.0 [0..1] [333..1]
gi|109048827 - gi|109048827|ref|XP_001109893.1| PREDICTED: glycogenin isoform 3 [Macaca mulatta]
gi|67971052 - gi|67971052|dbj|BAE01868.1| unnamed protein product [Macaca fascicularis]
354.0 [0..1] [333..1]

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Predicted Domain #1
Region A:
Residues: [1-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTDQAFVTLT TNDAYAKGAL VLGSSLKQHR TSRRLAVLTT PQVSDTMRKA LEIVFDEVIT  60
   61 VDILDSGDSA HLTLMKRPEL GVTLTKLHCW SLTQYSKCVF MDADTLVLAN IDDLFEREEL 120
  121 SAAPDPGWPD CFNSGVFVYQ PSVETYNQLL HVASEQGSFD GGDQGLLNTF FNSWATTDIR 180
  181 KHLPFIYNLS SISIYSYLPA FKAFGANAKV VHFLGQTKPW NYTYDTKTKS VRSEGHDPTM 240
  241 THPQFLNVWW DIFTTSVVPL LQQFGLVQDT CSYQHVEDVS GAVSHLSLGE TPATTQPFVS 300
  301 SEERKERWEQ GQADYMGADS FDNIKKKLDT YLQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 1zcuA
Description: apo form of the 162S mutant of glycogenin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring hexosyl groups 2.70047942699289 bayes_pls_golite062009
UDP-glycosyltransferase activity 2.33861720107822 bayes_pls_golite062009
transferase activity 2.17535315350752 bayes_pls_golite062009
catalytic activity 1.88676710996045 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 1.33788133706753 bayes_pls_golite062009
uridylyltransferase activity 1.27888067902271 bayes_pls_golite062009
cytidylyltransferase activity 1.14240569193314 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 1.10309252319727 bayes_pls_golite062009
nucleotidyltransferase activity 1.03393419806381 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 1.02084820914491 bayes_pls_golite062009
glycogenin glucosyltransferase activity 0.968757748180341 bayes_pls_golite062009
mannosyltransferase activity 0.91123217364068 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 0.897978517422275 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.513376694534047 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.2363835251362 bayes_pls_golite062009
guanylyltransferase activity 0.0539392112504681 bayes_pls_golite062009

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