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View Structure Prediction Details

Protein: HATA_DICDI
Organism: Dictyostelium discoideum
Length: 118 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HATA_DICDI.

Description E-value Query
Range
Subject
Range
gi|60468344, gi|... - gi|66812328|ref|XP_640343.1| actin binding protein [Dictyostelium discoideum AX4], gi|60468344|gb|EA...
HATB_DICDI - Hisactophilin-2 OS=Dictyostelium discoideum GN=hatB PE=1 SV=2
117.0 [0..1] [118..1]
gi|24415858 - gi|24415858|gb|AAN59911.1| hisactophilin [Expression vector pNCO113-hisactophilin]
116.0 [0..1] [118..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNRAFKSHH GHFLSAEGEA VKTHHGHHDH HTHFHVENHG GKVALKTHCG KYLSIGDHKQ  60
   61 VYLSHHLHGD HSLFHLEHHG GKVSIKGHHH HYISADHHGH VSTKEHHDHD TTFEEIII

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.69897
Match: 1hcdA
Description: STRUCTURE OF HISACTOPHILIN IS SIMILAR TO INTERLEUKIN-1 BETA AND FIBROBLAST GROWTH FACTOR
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
actin binding 6.16626056636074 bayes_pls_golite062009
actin filament binding 5.47921639660522 bayes_pls_golite062009
cytoskeletal protein binding 4.7222849266434 bayes_pls_golite062009
actin monomer binding 2.04365563273836 bayes_pls_golite062009
binding 1.56703165103362 bayes_pls_golite062009
protein binding 1.06346412997464 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle