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View Structure Prediction Details

Protein: ATG9_ARATH
Organism: Arabidopsis thaliana
Length: 866 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG9_ARATH.

Description E-value Query
Range
Subject
Range
gi|4432821, gi|2... - gi|4432821|gb|AAD20671.1| unknown protein [Arabidopsis thaliana], pir||E84718 hypothetical protein A...
1324.0 [0..2] [866..1]

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Predicted Domain #1
Region A:
Residues: [1-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMSSGHKGPN VRNFFKWQRG ESSSSLTTGL LHNESHEIEL SNYGGIPSPG SESPSGLLNG  60
   61 ESLNVQPIAD LDLFVERLYS YYRDKGLWCI IVKWAVELLS LGFIICFSGF FLLYVDWNGL 120
  121 QNAKCGMDAV ESGTKPCDLV KEAIHPHPLS PFTLTTAIIV GYLALFSVYW LFCFLRFFAQ 180
  181 LKDTLDFRHF YYNNL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [196-333]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HVTDNEILTM PWATVLEKVV QLQSSQCLCV VKDLSAHDMV MRLMRKENYL IGMLNKGLLS  60
   61 FPISHWIPGA GPAVKSAPDG TQYHLVLTKT LEWTLNWCIL QSMFDCNFRV RRDFVSNPTT 120
  121 LKKRLFVVGL AMLLLSPF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [334-459]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LVIFMLVYLF LRHAEQFYNH PSTASSRRWS NLSKWLFREF NEVDHLFKHR INSSVVHASE  60
   61 YLKQFPSPII SIIAKFVSFV SGGFAAVLII IAFLEESLLE GHIFGRNLFW YAAVFGTITA 120
  121 ISRAAI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [460-628]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDELLVLDPV GTMSLVVQNT HYMPKRWRGK ENKDDVRLEL ETLFQYTGMM LLEEIASIFI  60
   61 TPFLLMFVVP KRVDDILQFI KDFTVDIEGV GHVCSFSAFY FENHGNIKYG SPHNATRREQ 120
  121 RSSQGKMEKS FLSFQSSYPS WESDSLGKQF LSNLRTFRDR KLHEINTRH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [629-866]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSPSRAWRES TNTPALYRDI PRNPLASGNH TDSMWLIDPD QRNHPYLLDW YYTSQAHNRT  60
   61 DHPIERANEI LTANQNATDC WPPDLGIRGE DSRDLLNMEA STSGQFFRES ILRHDQPEGE 120
  121 DSYGSQHPLD GRNQWWGRGN HSQISTAHPA TTNSFIEPPD FINRYTAGNL LDNSWSRRSI 180
  181 EEEDEEEEEL DWEENARRNL SRTTFMDDND IEAGIDLHFD DVYSSRPQET STSSTTLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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