YRC Public Data Repository - Protein Structure Prediction

Protein:	ATP5L_BOVIN
Organism:	Bos taurus
Length:	103 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP5L_BOVIN.

Description	E-value	Query Range	Subject Range
gi\|12842190, gi\|... - gi\|12842190\|dbj\|BAB25507.1\| unnamed protein product [Mus musculus], gi\|12841973\|dbj\|BAB25423.1\| unna...	167.0	[0..1]	[103..1]
gi\|74354012 - gi\|74354012\|gb\|AAI02456.1\| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G [Bos t...	164.0	[0..1]	[103..1]
gi\|47058994, gi\|... - gi\|47058994\|ref\|NP_997681.1\| ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G [Rat...	163.0	[0..1]	[103..1]
ATP5L_PONAB - ATP synthase subunit g, mitochondrial OS=Pongo abelii GN=ATP5L PE=3 SV=1 ATP5L_PONPY - ATP synthase subunit g, mitochondrial - Pongo pygmaeus (Orangutan)	162.0	[0..1]	[103..1]
gi\|109108866 - gi\|109108866\|ref\|XP_001098196.1\| PREDICTED: similar to ATP synthase, H+ transporting, mitochondrial ... CB370802-1-1-309 - null ATP5L - ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G gi\|114640627, gi... - gi\|114640629\|ref\|XP_001161474.1\| PREDICTED: ATP synthase, H+ transporting, mitochondrial F0 complex,... HGNC:14247\|Ensem... - synthase, H+ transporting, mitochondrial Fo complex, subunit G gi\|117644952 - gi\|117644952\|emb\|CAL37942.1\| hypothetical protein [synthetic construct]	162.0	[0..1]	[103..1]

Back

Predicted Domain #1

Region A:
Residues: [1-103]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEFVRNLAE KAPALVNAAV TYSKPRLATF WYYAKVELVP PTPAEIPTAI QSLKKIINSA  60
   61 KTGSFKQLTV KEALLNGLVA TEVWMWFYVG EIIGKRGIIG YDV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	53.337242
Match:	PF04718.6
Description:	No description for PF04718.6 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits