YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ATP5I_BOVIN
Organism: Bos taurus
Length: 71 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATP5I_BOVIN.

Description E-value Query
Range
Subject
Range
gi|47223717 - gi|47223717|emb|CAF99326.1| unnamed protein product [Tetraodon nigroviridis]
93.0 [0..1] [71..1]
gi|68359567 - gi|68359567|ref|XP_696636.1| PREDICTED: similar to potassium channel, subfamily V, member 2 [Danio r...
91.0 [0..1] [71..549]
ATP5I_PONPY - ATP synthase e chain, mitochondrial - Pongo pygmaeus (Orangutan)
ATP5I_PONAB - ATP synthase subunit e, mitochondrial OS=Pongo abelii GN=ATP5I PE=3 SV=3
87.0 [0..1] [71..1]
gi|95102788, gi|... - gi|95102788|gb|ABF51335.1| H+ transporting ATP synthase subunit e [Bombyx mori], gi|148298748|ref|NP...
87.0 [0..4] [71..9]
gi|263673 - gi|263673|gb|AAB24947.1| F1Fo-ATPase subunit e [Mus sp.]
ATP5I_MOUSE - ATP synthase subunit e, mitochondrial OS=Mus musculus GN=Atp5i PE=1 SV=2
86.0 [0..1] [71..1]
gi|118778802, gi... - gi|118778802|ref|XP_308877.3| AGAP006879-PA [Anopheles gambiae str. PEST], gi|116132559|gb|EAA04251....
AGAP006879-PA - F-type H+-transporting ATPase subunit e|protein_coding|2L:39319873:39320419:1|gene:AGAP006879
84.0 [0..4] [70..7]
ATP5I_PIG - ATP synthase e chain, mitochondrial (EC 3.6.3.14) - Sus scrofa (Pig)
84.0 [0..1] [71..1]

Back

Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPPVQVSPL IKLGRYSALF LGMAYGAKRY NYLKPRAEEE RRLAAEEKKK RDEQKRIERE  60
   61 LAEAQEDTIL K

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 27.060481
Match: PF05680.3
Description: No description for PF05680.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.380 0.809 hydrogen ion transporting ATP synthase activity, rotational mechanism f.17.1 F1F0 ATP synthase subunit C
View Download 0.459 0.006 hydrogen ion transporting ATP synthase activity, rotational mechanism a.60.1 SAM/Pointed domain
View Download 0.410 0.003 hydrogen ion transporting ATP synthase activity, rotational mechanism a.64.1 Saposin
View Download 0.385 0.001 hydrogen ion transporting ATP synthase activity, rotational mechanism a.30.2 Homodimeric domain of signal transducing histidine kinase
View Download 0.588 0.001 hydrogen ion transporting ATP synthase activity, rotational mechanism a.24.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)

Predicted functions:

Term Confidence Notes
binding 1.31894953589114 bayes_pls_golite062009
protein binding 0.691242652757403 bayes_pls_golite062009
catalytic activity 0.594511515551382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle