YRC Public Data Repository - Protein Structure Prediction

Protein:	ALDA_ECOLI
Organism:	Escherichia coli
Length:	479 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ALDA_ECOLI.

Description	E-value	Query Range	Subject Range
gi\|20372798 - gi\|20372798\|emb\|CAD30313.1\| aldehyde dehydrogenase [Geobacillus stearothermophilus]	608.0	[0..8]	[477..21]
gi\|52785994, gi\|... - gi\|52785994\|ref\|YP_091823.1\| DhaS [Bacillus licheniformis ATCC 14580], gi\|52348496\|gb\|AAU41130.1\| Dh...	606.0	[0..8]	[479..24]
gi\|45523555, gi\|... - gi\|67925207\|ref\|ZP_00518574.1\| Aldehyde dehydrogenase (NAD+) [Crocosphaera watsonii WH 8501], gi\|678...	601.0	[0..6]	[478..15]
gi\|70992355, gi\|... - gi\|70992355\|ref\|XP_751026.1\| aldehyde dehydrogenase AldA [Aspergillus fumigatus Af293], gi\|66848659\|... gi\|159124596 - gi\|159124596\|gb\|EDP49714.1\| aldehyde dehydrogenase AldA, putative [Aspergillus fumigatus A1163]	599.0	[0..3]	[479..77]
gi\|25284183 - pir\|\|C83717 NADP-dependent aldehyde dehydrogenase dhaS [imported] - Bacillus halodurans (strain C-12... gi\|10173152, gi\|... - gi\|15613102\|ref\|NP_241405.1\| NADP-dependent aldehyde dehydrogenase [Bacillus halodurans C-125], gi\|1...	598.0	[0..8]	[478..25]
gi\|56961829, gi\|... - gi\|56961829\|ref\|YP_173551.1\| aldehyde dehydrogenase [Bacillus clausii KSM-K16], gi\|56908063\|dbj\|BAD6...	597.0	[0..8]	[478..25]
gi\|88179418, gi\|... - gi\|88179418\|gb\|EAQ86886.1\| hypothetical protein CHGG_08139 [Chaetomium globosum CBS 148.51], gi\|1161...	597.0	[0..3]	[478..16]
gi\|114624618, gi... - gi\|114624620\|ref\|XP_001170480.1\| PREDICTED: similar to aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 5 p...	596.0	[0..8]	[478..38]
gi\|89269880 - gi\|89269880\|emb\|CAJ83424.1\| aldehyde dehydrogenase 2 family (mitochondrial) [Xenopus tropicalis]	596.0	[0..8]	[478..42]
gi\|89087823, gi\|... - gi\|89097527\|ref\|ZP_01170416.1\| aldehyde dehydrogenase [Bacillus sp. NRRL B-14911], gi\|89087823\|gb\|EA...	596.0	[0..8]	[477..21]

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Predicted Domain #1

Region A:
Residues: [1-479]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVPVQHPMY IDGQFVTWRG DAWIDVVNPA TEAVISRIPD GQAEDARKAI DAAERAQPEW  60
   61 EALPAIERAS WLRKISAGIR ERASEISALI VEEGGKIQQL AEVEVAFTAD YIDYMAEWAR 120
  121 RYEGEIIQSD RPGENILLFK RALGVTTGIL PWNFPFFLIA RKMAPALLTG NTIVIKPSEF 180
  181 TPNNAIAFAK IVDEIGLPRG VFNLVLGRGE TVGQELAGNP KVAMVSMTGS VSAGEKIMAT 240
  241 AAKNITKVCL ELGGKAPAIV MDDADLELAV KAIVDSRVIN SGQVCNCAER VYVQKGIYDQ 300
  301 FVNRLGEAMQ AVQFGNPAER NDIAMGPLIN AAALERVEQK VARAVEEGAR VAFGGKAVEG 360
  361 KGYYYPPTLL LDVRQEMSIM HEETFGPVLP VVAFDTLEDA ISMANDSDYG LTSSIYTQNL 420
  421 NVAMKAIKGL KFGETYINRE NFEAMQGFHA GWRKSGIGGA DGKHGLHEYL QTQVVYLQS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	145.0
Match:	2opxA
Description:	No description for 2opxA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits