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View Structure Prediction Details

Protein: Y1464_NITEU
Organism: Nitrosomonas europaea ATCC 19718
Length: 224 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y1464_NITEU.

Description E-value Query
Range
Subject
Range
gi|67154910 - gi|67154910|ref|ZP_00416655.1| DNA repair protein RadC [Azotobacter vinelandii AvOP]
gi|67154910, gi|... - gi|67154910|ref|ZP_00416655.1| DNA repair protein RadC [Azotobacter vinelandii AvOP], gi|67089043|gb...
312.0 [0..1] [224..112]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISDWPEAE RPREKLIEKG AAALSDAELL AIFLRTGITG VSAVELARKL LTHFGSLTKL  60
   61 CAASLHEFSE LPGMGPAKFA QLQAVMEMAK RALA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1g291
Description: Maltose transport protein MalK, C-terminal domain; Maltose transport protein MalK, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [95-224]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EELKNGDIMD SPQSVRNYLC LSLKGKPYEV FVGIFLDARH RTIVTEELFN GTLTQASVYP  60
   61 REVVKRALYH NAAAMIFAHN HPSGIAEPST ADEILTQSLK QALALVDVKV LDHFVIGSSE 120
  121 VVSFAERGLI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.69897
Match: 2qlcA
Description: No description for 2qlcA was found.

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