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View Structure Prediction Details

Protein: SCP8_ARATH
Organism: Arabidopsis thaliana
Length: 433 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP8_ARATH.

Description E-value Query
Range
Subject
Range
gi|20197274, gi|... - gi|42570885|ref|NP_973516.1| SNG1 (SINAPOYLGLUCOSE 1); serine carboxypeptidase [Arabidopsis thaliana...
466.0 [0..1] [433..1]

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Predicted Domain #1
Region A:
Residues: [1-433]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKIKFLLL LVLYHHVDSA SIVKFLPGFE GPLPFELETG YIGIGEDENV QFFYYFIKSE  60
   61 NNPKEDPLLI WLNGGPGCSC LGGIIFENGP VGLKFEVFNG SAPSLFSTTY SWTKMANIIF 120
  121 LDQPVGSGFS YSKTPIDKTG DISEVKRTHE FLQKWLSRHP QYFSNPLYVV GDSYSGMIVP 180
  181 ALVQEISQGN YICCEPPINL QGYMLGNPVT YMDFEQNFRI PYAYGMGLIS DEIYEPMKRI 240
  241 CNGNYYNVDP SNTQCLKLTE EYHKCTAKIN IHHILTPDCD VTNVTSPDCY YYPYHLIECW 300
  301 ANDESVREAL HIEKGSKGKW ARCNRTIPYN HDIVSSIPYH MNNSISGYRS LIYSGDHDIA 360
  361 VPFLATQAWI RSLNYSPIHN WRPWMINNQI AGYTRAYSNK MTFATIKGGG HTAEYRPNET 420
  421 FIMFQRWISG QPL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.045757
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 3.12335967816646 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.55159061470324 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.815337671271829 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
binding 0.351031277062254 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle