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View Structure Prediction Details

Protein: RBOHF_ARATH
Organism: Arabidopsis thaliana
Length: 944 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for RBOHF_ARATH.

Predicted Domain #1
Region A:
Residues: [1-209]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS  60
   61 VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF RQFSQELKAE AVAKAKQLSQ 120
  121 ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL 180
  181 RGLRFISNKQ KNVDGWNDVQ SNFEKFEKN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 25.09691
Match: 2jdoA
Description: No description for 2jdoA was found.

Predicted Domain #2
Region A:
Residues: [210-345]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYIYRSDFAQ CIGMKDSKEF ALELFDALSR RRRLKVEKIN HDELYEYWSQ INDESFDSRL  60
   61 QIFFDIVDKN EDGRITEEEV KEIIMLSASA NKLSRLKEQA EEYAALIMEE LDPERLGYIE 120
  121 LWQLETLLLQ KDTYLN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.0
Match: 2aaoA
Description: Regulatory apparatus of Calcium Dependent protein kinase from Arabidopsis thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [346-470]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSQALSYTSQ ALSQNLQGLR GKSRIHRMSS DFVYIMQENW KRIWVLSLWI MIMIGLFLWK  60
   61 FFQYKQKDAF HVMGYCLLTA KGAAETLKFN MALILFPVCR NTITWLRSTR LSYFVPFDDN 120
  121 INFHK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [471-944]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TIAGAIVVAV ILHIGDHLAC DFPRIVRATE YDYNRYLFHY FQTKQPTYFD LVKGPEGITG  60
   61 ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY 120
  121 FAKPWYVRTT WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF 180
  181 RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR VFSEVCEPPV 240
  241 GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN 300
  301 NIVKMEEHAD SISDFSRSSE YSTGSNGDTP RRKRILKTTN AYFYWVTREQ GSFDWFKGVM 360
  361 NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP 420
  421 NWKKVLTKLS SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.30103
Match: 1cqxA
Description: Flavohemoglobin, N-terminal domain; Flavohemoglobin, central domain; Flavohemoglobin, C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle