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View Structure Prediction Details

Protein: JAG_ARATH
Organism: Arabidopsis thaliana
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for JAG_ARATH.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
388.0 [0..2] [252..2565]
gi|68365042 - gi|68365042|ref|XP_690837.1| PREDICTED: similar to zinc finger protein 135 (clone pHZ-17) [Danio rer...
385.0 [0..2] [253..57]
gi|114626840 - gi|114626840|ref|XP_528435.2| PREDICTED: zinc finger protein 79 (pT7) [Pan troglodytes]
365.0 [0..8] [252..401]
gi|76642592 - gi|76642592|ref|XP_599815.2| PREDICTED: similar to zinc finger protein 329 [Bos taurus]
357.0 [0..4] [252..618]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHEENYLDL NNLPDDFSKD GNKQALEEGS SSGQRKKKGS KEGKDESGKV YECRFCSLKF  60
   61 CKSQALGGHM NRHRQERETE TLNQARQLVY RNDTITPPGI SPFGYHHTTD PTIYRSVYSS 120
  121 PMIYPGSSST NLVPQPPMPP PPPPYPYSSN QYSPHNHF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.39794
Match: 2i13A
Description: No description for 2i13A was found.

Predicted Domain #2
Region A:
Residues: [159-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDYYLNPSFR GSRSISPSPN LPTTTTVDYM ADSPVEPGYT CVGAPIGPTG FPIRGPSIVR  60
   61 APLEPPQGRD GDASRQRLDH SLRFPINRFQ DHHSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle