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View Structure Prediction Details

Protein: gi|44681452, gi|...
Organism: Arabidopsis thaliana
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|44681452, gi|....

Description E-value Query
Range
Subject
Range
gi|25412163, gi|... - gi|3738317|gb|AAC63658.1| unknown protein [Arabidopsis thaliana], pir||F84629 hypothetical protein A...
266.0 [0..1] [188..1]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHFSARLKL LSSNDGLSFG VDSRDQFRQS LYMAGGGSPL VPIRMSRLKF CARIFSSYSF  60
   61 PYKRKKIRDL DNTEKNLDID EDNDEWDFDG DDDGLETDDH LS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CFRGLVLDIS YRPVNVVCWK RAICLEYMDK ADVLEYYDQT VSSPTGSFYI PAVLRVPH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [161-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LLQVVKRRRV KNSLSRKNIL LRDDYTCQYC SSRENLTIDH VMPVSRGGEW TWQNLVAACS  60
   61 RCNSRKGQKT ADEAHMKLLK VPKEPKDYDI VAIPLTNAAI RMLRSNKGMP EEWRQYLAKP 120
  121 LSET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.69897
Match: 2qgpA
Description: No description for 2qgpA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle