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View Structure Prediction Details

Protein: WEX_ARATH
Organism: Arabidopsis thaliana
Length: 288 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for WEX_ARATH.

Description E-value Query
Range
Subject
Range
gi|7268091, gi|7... - pir||T05256 hypothetical protein F18A5.260 - Arabidopsis thaliana, gi|7268091|emb|CAB78429.1| putati...
237.0 [0..1] [277..1]

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Predicted Domain #1
Region A:
Residues: [1-94]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSNWIDDA FTEEELLAID AIEASYNFSR SSSSSSSAAP TVQATTSVHG HEEDPNQIPN  60
   61 NIRRQLPRSI TSSTSYKRFP LSRCRARNFP AMRF

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.571 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.503 a.39.4 Hypothetical protein MTH865
View Download 0.349 a.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
View Download 0.337 a.74.1 Cyclin-like
View Download 0.305 f.14.1 Voltage-gated potassium channels

Predicted Domain #2
Region A:
Residues: [95-288]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGRILYSKTA TEVDKRAMQL IKVLDTKRDE SGIAFVGLDI EWRPSFRKGV LPGKVATVQI  60
   61 CVDSNYCDVM HIFHSGIPQS LQHLIEDSTL VKVGIGIDGD SVKLFHDYGV SIKDVEDLSD 120
  121 LANQKIGGDK KWGLASLTET LVCKELLKPN RIRLGNWEFY PLSKQQLQYA ATDAYASWHL 180
  181 YKVLKDLPDA VSGS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.045757
Match: 2fbtA
Description: No description for 2fbtA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle