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View Structure Prediction Details

Protein: gi|34394189, gi|...
Organism: Oryza sativa Japonica Group
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34394189, gi|....

Description E-value Query
Range
Subject
Range
UP3_ARATH - Stress-response A/B barrel domain-containing protein UP3 OS=Arabidopsis thaliana GN=UP3 PE=2 SV=1
263.0 [0..1] [257..1]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICLRAAFPL TSSFSSSPLR RLALKPSSSR AAAAAAMSSA PATAIAAPVE HIVLIKVRPE  60
   61 AAASGAAAAM VSSLQALSSV VPGLSYIHVG PVLRLRSPAA EALGPTHVLH SRYATKPDLA 120
  121 AYAAHPAHVA AVQGHVLPNA LDTTAIDWVN AAL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.69897
Match: 1q4rA
Description: Gene Product of At3g17210 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [154-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 APSPVTPGSA VRLTLAKVKE GVEVPQLVEK VAAATAAAGE AKGARVSFGE NFSPARAKGY  60
   61 QFGMVAVFDS VEELDAVEGD GKVQEAKAAV RPLLDEVLVL DFVVGPAAVE APAPANL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.66
Match: 1q4rA
Description: Gene Product of At3g17210 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

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