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View Structure Prediction Details

Protein: gi|17065302, gi|...
Organism: Arabidopsis thaliana
Length: 1048 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|17065302, gi|....

Predicted Domain #1
Region A:
Residues: [1-810]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQSLELLLI QFLMPDNDAR RQAEDQIKRL AKDPQVVPAL VQHLRTAKTP NVRQLAAVLL  60
   61 RKRITGHWAK LSPQLKQHVK QSLIESITVE NSPPVRRASA NVVSVVAKYA VPAGEWPDLL 120
  121 TFLFQCSQSA QEDHREVALI LFSSLTETIG NTFRPYFADL QALLLKCMQD ESSSRVRVAA 180
  181 LKAVGSFLEF TNDGDEVVKF RDFIPSILDV SRKCIASGEE DVAILAFEIF DELIESPAPL 240
  241 LGDSVKAIVQ FSLEVSCNQN LESSTRHQAI QIVSWLAKYK YNSLKKHKLV IPILQVMCPL 300
  301 LAESSDQEDD DDLAPDRASA EVIDTLAMNL PKHVFLPVLE FASVHCQSTN LKFREASVTA 360
  361 LGVISEGCFD LMKEKLDTVL NIVLGALRDP ELVVRGAASF AIGQFAEHLQ PEILSHYQSV 420
  421 LPCLLIAIED TSEEVKEKSH YALAAFCENM GEEIVPLLDH LMGKLMAALE NSPRNLQETC 480
  481 MSAIGSVAAA AEQAFNPYAE RVLELMKFFM VLTKDEDLRA RARSTELVGI VAMSVGRKGM 540
  541 EAILPPFIDA AISGFELEFS ELREYTHGFF SNVAEILDDT FAQYLPRVMP LVFASCNLDD 600
  601 GSAVDIDESD DENVNDFGGV SSDDDADDEP RVRNISVRTG VLDEKAAATQ ALGLFALHTK 660
  661 SAFAPYLEES LKIMDKHSAY FHEDVRLQAV TGLKHILAAA HAIFQTHNDG TGKANEILDT 720
  721 VMNNYIKTMT DDDDKEVVAQ ACISVADIMK DYGYPAIQKY LSPLVDATLL LLTEKAACQQ 780
  781 LEDESDIDDD DTGHDEVLMD AVSDLLPAFA 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.0
Match: 2ot8A
Description: No description for 2ot8A was found.

Predicted Domain #2
Region A:
Residues: [811-1048]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KCMGSQFEPV FAQFFEPLMK FAKASRPPQD RTMVVASLAE VAQDMGLPIS SYVDRLMPLV  60
   61 LKELGSPEAT NRRNAAFCVG ELCKNGGETA LKYFGDVLRG ISPLFGDSEP DLAVRDNAAG 120
  121 ATARMIVVHP QLVPLNQVLP VFLRGLPLKE DQEESMAVYT CIYSLVSSSN PQIFSHVPEL 180
  181 VKIFGQVLES PVEKVEVKAI VGRTFSHLIS VYGNQLQPII SSLPPSQANV LAAFASTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 12.39794
Match: 3c5wA
Description: No description for 3c5wA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle