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View Structure Prediction Details

Protein: gi|7494422
Organism: Plasmodium falciparum
Length: 327 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494422.

Description E-value Query
Range
Subject
Range
gi|124507289, gi... - gi|23613887|ref|NP_704908.1| rifin [Plasmodium falciparum 3D7], gi|23613002|ref|NP_704541.1| RIFIN [...
407.0 [0..1] [327..1]
gi|5901723 - gi|5901723|gb|AAD55383.1|AF161311_1 variant surface antigen rifin 3 [Plasmodium falciparum]
402.0 [0..1] [327..1]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYINILL FALPLNILIY NQRNHKSTTH HTLKIPITRL LCECELYAPT NYDSDPEMKR  60
   61 VMQQFVDRTT Q

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.715 N/A N/A a.47.2 t-snare proteins
View Download 0.672 N/A N/A a.69.3 1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain
View Download 0.638 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.577 N/A N/A b.82.3 cAMP-binding domain-like
View Download 0.572 N/A N/A a.7.2 Enzyme IIa from lactose specific PTS, IIa-lac

Predicted Domain #2
Region A:
Residues: [72-327]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RFHEYDNRMK DKRQKCKDKC DKEIQKIILK DKLEKELMDK FATLQTDIQN DAIPTCVCEK  60
   61 SLADKVEKVC FRCGGLLGGG IAPGWGLVSG LGYVGWTNYV TQTALQKGIE AVISYLEQIP 120
  121 GIKGLPGFNL ANIVNPNNYS SGGLLTTAID AAARPICSVN HSKTPAFCSY ATQNGGSIIA 180
  181 KVSVDAENAA NAGIDAASAE AANLAPKTLT LTNTIIVSFV AIVVIVLVML IIYFILHYRR 240
  241 KKKMKKKLQY IKLLKE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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