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View Structure Prediction Details

Protein: gi|7494418
Organism: Plasmodium falciparum
Length: 348 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494418.

Description E-value Query
Range
Subject
Range
gi|23613378, gi|... - gi|23613378|ref|NP_703222.1| RIFIN [Plasmodium falciparum 3D7], gi|23510594|emb|CAD48979.1| rifin [P...
429.0 [0..1] [348..1]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLHYTKILL FFFPLNILLT SYHAHNKNKP YITSRHRQTS TSRVLSESDP YMLNYDNDDD  60
   61 MKSVKENFDR QTSQRFEEYE GRMKDKRRKC KEQCDKDIQE IILKDKMEKS LAEKVEIGCL 120
  121 RC

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-226]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCGLGGVAAS VGIFGTVAVK ELAKTATAAA VAAAQEAVKD AAMAATIKAV GAAAGKEFVI  60
   61 AGLKQMGVST LDGKELGTYI TATNYTNVKN IAHAINTQYE PSSC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [227-348]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LITVPVDSKP ICTWVRAKEG AARVIQGKQF STQETIKVAV TSIVSDAENV AAAAEQQATK  60
   61 DAIKASTLAV DSKYAICQNA IIASVVALLI IVLIMIIIYL VLRYRRKKKM KKKAEYTKLL 120
  121 NQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle