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View Structure Prediction Details

Protein: gi|7494416
Organism: Plasmodium falciparum
Length: 316 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494416.

Description E-value Query
Range
Subject
Range
gi|124807160, gi... - gi|23509211|ref|NP_701879.1| rifin [Plasmodium falciparum 3D7], gi|23497053|gb|AAN36603.1|AE014852_4...
392.0 [0..1] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-121]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKMHYSEILF FSLSLNILIT SSYAHSENKQ YITPYTPNTS SRVLTECDIK MSIYDNDGDM  60
   61 KSVKENFDRQ TSERFEEYDE RMKDKRRKCK EQCDKDIQEI IVKDKMEKSL AKKVEKGCLR 120
  121 C

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.656 N/A N/A a.163.1 Crustacean CHH/MIH/GIH neurohormone
View Download 0.480 N/A N/A a.47.2 t-snare proteins
View Download 0.470 N/A N/A a.23.1 HSC20 (HSCB), C-terminal oligomerisation domain
View Download 0.416 N/A N/A a.118.1 ARM repeat
View Download 0.414 N/A N/A a.130.1 Chorismate mutase II

Predicted Domain #2
Region A:
Residues: [122-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCGLGGVAAS VGIIGPIAVN EVKKAALVAA AQKGIEVGMA KAIEELGKIV GLSDFSYLNW  60
   61 SAMITATTYY KPMKLVNIVN SANSMCTDSN PAFTSLFCKA SYRINSEVSS SRFTEVISQE 120
  121 AAKAASAAGE AAKNAEKAQI ALVNEESAHL YSAIGYSVIA ILIILLVMVI IYLILRYRRK 180
  181 KKMNKKLQYT KLLNQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle