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View Structure Prediction Details

Protein: gi|7494364
Organism: Plasmodium falciparum
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494364.

Description E-value Query
Range
Subject
Range
gi|7494359, gi|2... - pir||T09080 probable chloroquine resistance protein CG2 (strain HB3) - malaria parasite (Plasmodium ...
142.0 [0..5] [347..2253]
gi|56500101 - gi|56500101|emb|CAH97592.1| conserved hypothetical protein [Plasmodium berghei]
gi|68074903 - gi|68074903|ref|XP_679368.1| hypothetical protein [Plasmodium berghei strain ANKA]
130.0 [0..60] [400..10]
gi|82914527 - gi|82914527|ref|XP_728801.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23485335 - gi|23485335|gb|EAA20366.1| hypothetical protein [Plasmodium yoelii yoelii]
121.0 [0..58] [400..10]
gi|7494193 - pir||T18427 hypothetical protein C0335c - malaria parasite (Plasmodium falciparum)
gi|16805171, gi|... - gi|3649755|emb|CAB11104.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7...
115.0 [0..2] [339..1022]
gi|56525893 - gi|56525893|emb|CAH75448.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
gi|70952789 - gi|70952789|ref|XP_745539.1| hypothetical protein [Plasmodium chabaudi chabaudi]
110.0 [0..41] [399..10]

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Predicted Domain #1
Region A:
Residues: [1-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKNTLKRRS RLLQKNEARM SMLLGRNLDD EISKEKKESN KNDKHKKNDQ HKKNDKSNQN  60
   61 GEDNQNGEDN QNDESNQNDE HKKNDEHKKN DEHNQNDEHN QNDEHNQNDE HNQNDEHNQN 120
  121 DEHNQNDEHN QNDEHNQNDE SNQNDKNRKE IPPKEEKDKE NNPSVVMENN NNIRKDQDNK 180
  181 TSEHKSSTNI YNKDKNND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [199-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YNKLLDKDDN NNNNKNINKN DENDFTSINN DIPNKNKITS QFIITKHEKL HFIILIILCI  60
   61 FISIFKVYYN NKNNLIYKKK KKGNNNLNIV QMIFFNFINS PNFFFSFSVF YNILFLLIIM 120
  121 LMYIKKNNIT RKRIQD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [335-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FFVNMKNKLN NQNEHVFYFI NNAVLCILFM GRIFKSYIIS MFLINLFHDI LHNYLIGVSM  60
   61 LQPQKVVLL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.0
Match: 1kf6C
Description: Fumarate reductase subunit FrdC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.386287630369512 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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