YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|7494442
Organism:	Plasmodium falciparum
Length:	354 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494442.

Description	E-value	Query Range	Subject Range
UBIE_PASMU - Ubiquinone/menaquinone biosynthesis methyltransferase ubiE OS=Pasteurella multocida GN=ubiE PE=3 SV=... UBIE_PASMU - Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pasteurella multocida (strain Pm70) ...	200.0	[0..18]	[352..2]
gi\|71038264, gi\|... - gi\|71065279\|ref\|YP_264006.1\| 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / demethylmenaquinone...	198.0	[0..22]	[352..111]
gi\|92393196, gi\|... - gi\|93005518\|ref\|YP_579955.1\| ubiquinone/menaquinone biosynthesis methyltransferases [Psychrobacter c...	196.0	[0..22]	[352..99]
gi\|71146527, gi\|... - gi\|71280787\|ref\|YP_267060.1\| ubiquinone/menaquinone biosynthesis methlytransferase UbiE [Colwellia p...	195.0	[0..23]	[352..8]
gi\|77973692 - gi\|77973692\|ref\|ZP_00829238.1\| COG2226: Methylase involved in ubiquinone/menaquinone biosynthesis [Y...	194.0	[0..41]	[352..8]
gi\|76591411, gi\|... - gi\|76793309\|ref\|ZP_00775798.1\| Ubiquinone/menaquinone biosynthesis methyltransferase [Pseudoalteromo...	194.0	[0..30]	[352..12]
gi\|70991851, gi\|... - gi\|70991851\|ref\|XP_750774.1\| ubiquinone biosynthesis methlytransferase Coq5 [Aspergillus fumigatus A... gi\|159124336 - gi\|159124336\|gb\|EDP49454.1\| ubiquinone biosynthesis methlytransferase Coq5, putative [Aspergillus fu...	194.0	[0..13]	[352..18]
gi\|40744873, gi\|... - gi\|67522573\|ref\|XP_659347.1\| hypothetical protein AN1743.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	193.0	[0..16]	[352..21]
gi\|68073831 - gi\|68073831\|ref\|XP_678830.1\| UbiE-like methlytransferase [Plasmodium berghei strain ANKA] gi\|56499422 - gi\|56499422\|emb\|CAI00233.1\| UbiE-like methlytransferase, putative [Plasmodium berghei]	193.0	[0..43]	[353..1]
gi\|238784385, gi... - gi\|77956557\|ref\|ZP_00820647.1\| COG2226: Methylase involved in ubiquinone/menaquinone biosynthesis [Y... gi\|238798037, gi... - gi\|77961745\|ref\|ZP_00825576.1\| COG2226: Methylase involved in ubiquinone/menaquinone biosynthesis [Y...	193.0	[0..41]	[352..8]

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Predicted Domain #1

Region A:
Residues: [1-354]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKITKIINYN NFKITNVWGG IISKASHFST QHGQYDKSER ICNFGFQKVS EEIKSRLVYN  60
   61 LFSNVCNKYD IMNDMMSLLV HRFWKDQFVK ELDILLKYHS YNIQDYVYQH YKDHSSNNEK 120
  121 IQKKNENTSD TNGYSNNYSV YSDIPNYKIL DLAGGTGDIA FRILEKSKFY LKKNNQSIPF 180
  181 DHISYQQYLP HIIVCDVNND MLNVGKKKAA TLGYDQNLTW LVQNAENLES VESNSIDVIT 240
  241 LSFGIRNFTN IPQALKEIHR VLKPGGRFLC LEFSKVQCHI FNIFYKFYLN NVIPIIGKVV 300
  301 ANDMKAYKYL AESIQTFLTP DELAQLFHQA NFKNITYTTM TMGIVSIHSA YKLV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	15.0
Match:	2r3sA
Description:	No description for 2r3sA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits