YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|13357166
Organism:	Plasmodium falciparum
Length:	216 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13357166.

Description	E-value	Query Range	Subject Range
gi\|62901916 - gi\|62901916\|gb\|AAY18909.1\| thioredoxin peroxidase 1-like [synthetic construct]	243.0	[0..11]	[213..22]
PRDX2_CRIGR - Peroxiredoxin-2 OS=Cricetulus griseus GN=PRDX2 PE=2 SV=3	240.0	[0..22]	[213..8]
gi\|51980440 - gb\|AAH82149.1\| Unknown (protein for MGC:98395) [Xenopus laevis] PRDX2_MOUSE - Peroxiredoxin-2 OS=Mus musculus GN=Prdx2 PE=1 SV=3	239.0	[0..20]	[213..6]
gi\|60818622, gi\|... - gi\|61362999\|gb\|AAX42317.1\| peroxiredoxin 2 [synthetic construct], gi\|60818622\|gb\|AAX36471.1\| peroxir... PRDX2_MACFA - Peroxiredoxin-2 OS=Macaca fascicularis GN=PRDX2 PE=2 SV=3 gi\|114675617 - gi\|114675617\|ref\|XP_524127.2\| PREDICTED: peroxiredoxin 2 [Pan troglodytes] gi\|109123563, gi... - gi\|109123563\|ref\|XP_001109216.1\| PREDICTED: peroxiredoxin 2 isoform 5 [Macaca mulatta], gi\|109123561... PRDX2 - peroxiredoxin 2	239.0	[0..20]	[213..6]
gi\|149037815, gi... - gi\|34849738\|gb\|AAH58481.1\| Peroxiredoxin 2 [Rattus norvegicus], gi\|149037815\|gb\|EDL92175.1\| rCG51106...	239.0	[0..22]	[213..8]

Back

Predicted Domain #1

Region A:
Residues: [1-216]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLKKLCRSN FFGNSRRSFS LVTKKAYNFT AQGLNKNNEI INVDLSSFIG QKYCCLLFYP  60
   61 LNYTFVCPTE IIEFNKHIKD FENKNVELLG ISVDSVYSHL AWKNMPIEKG GIGNVEFTLV 120
  121 SDINKDISKN YNVLYDNSFA LRGLFIIDKN GCVRHQTVND LPIGRNVQEV LRTIDSIIHV 180
  181 DTSGEVCPIN WKKGQKAFKP TTESLIDYMN NANKNV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	55.154902
Match:	2c0dA
Description:	No description for 2c0dA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits