YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|1419724
Organism:	Plasmodium falciparum
Length:	205 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|1419724.

Description	E-value	Query Range	Subject Range
GX41_MOUSE, GPX4... - (O70325) Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor (EC 1.11.1.12) (...	161.0	[0..1]	[203..1]
GX41_RAT, GPX41_RAT - (P36970) Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor (EC 1.11.1.12) (...	159.0	[0..1]	[203..1]
GPX4_BOVIN - Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor - Bos taurus (Bovine)	159.0	[0..1]	[203..1]
GPX4_CEBAP - Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor - Cebus apella (Brown-cap...	158.0	[0..1]	[199..1]
GPX4 - glutathione peroxidase 4 (phospholipid hydroperoxidase) GPX4_PONPY - Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor - Pongo pygmaeus (Orangut...	157.0	[0..1]	[199..1]
GPX4_PIG - Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor - Sus scrofa (Pig)	157.0	[0..1]	[203..1]
GPX4_MACFU - Phospholipid hydroperoxide glutathione peroxidase, mitochondrial precursor - Macaca fuscata fuscata ...	156.0	[0..1]	[199..1]
gi\|92894223 - gi\|92894223\|gb\|ABE92133.1\| Glutathione peroxidase [Medicago truncatula]	156.0	[0..16]	[203..84]

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Predicted Domain #1

Region A:
Residues: [1-205]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFSMFIKFI LPISFICYNF GKKFNMFSYF QKIKVSEQEL LSSIYDYEVK DLSGSNVSMS  60
   61 KFKNKVLIIF NSASKCGLTK NHVEQFNKLH EKYNARGLEI LAFPTSQFLN QEFDNTKDIC 120
  121 TFNEKNKIKY NMFSPIEVNG DNTHPLFKYL KKNCDSMHDE NGTLKSIGWN FGKFLVDKNG 180
  181 EVVNYFSPKT NPLDLEKIII QLLQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.045757
Match:	2obiA
Description:	No description for 2obiA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits