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View Structure Prediction Details

Protein: CRT_PLAFA
Organism: Plasmodium falciparum
Length: 424 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRT_PLAFA.

Description E-value Query
Range
Subject
Range
gi|7331103, gi|7... - gi|7331103|gb|AAF60274.1|AF233067_1 putative chloroquine resistance transporter [Plasmodium falcipar...
311.0 [0..1] [424..1]

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Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFASKKNNQ KNSSKNDERY RELDNLVQEG NGSRLGGGSC LGKCAHVFKL IFKEIKDNIF  60
   61 IYILSIIYLS VCVMNKIFAK RTLNKIGNYS FVTSETHNFI CMIMFFIVYS LFGNKKGN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [119-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKERHRSFNL QFFAISMLDA CSVILAFIGL TRTTGNIQSF VLQLSIPINM FFCFLILRYR  60
   61 YHLYNYLGAV IIVVTIALVE MKLSFETQEE NSIIFNLVLI SALIPVC

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.06
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [226-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSNMTREIVF KKYKIDILRL NAMVSFFQLF TSCLILPVYT LPFLKQLHLP YNEIWTNIKN  60
   61 GFACLFLGRN TVVE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [300-424]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NCGLGMAKLC DDCDGAWKTF ALFSFFNICD NLITSYIIDK FSTMTYTIVS CIQGPAIAIA  60
   61 YYFKFLAGDV VREPRLLDFV TLFGYLFGSI IYRVGNIILE RKKMRNEENE DSEGELTNVD 120
  121 SIITQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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