YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|86171923, gi|...
Organism: Plasmodium falciparum 3D7
Length: 376 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|86171923, gi|....

Description E-value Query
Range
Subject
Range
gi|124505671, gi... - gi|23613376|ref|NP_703220.1| RIFIN [Plasmodium falciparum 3D7], gi|23510592|emb|CAD48976.1| rifin [P...
466.0 [0..1] [376..1]

Back

Predicted Domain #1
Region A:
Residues: [1-143]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHYINILL FELPLNILIY NQRNHYITRT PKATTRSLSE CELYAPSNYD NDPQMKEVMD  60
   61 NFNRQTQQRF HEYDHRMKTT RQKCKEQCDK EIQKIILKDK LEKELMDKFA TLHTDIQNDA 120
  121 IPTCVCEKSV ADKVEKNCMK CTQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.346 N/A N/A c.115.1 Hypothetical protein MTH777 (MT0777)
View Download 0.346 N/A N/A c.115.1 Hypothetical protein MTH777 (MT0777)
View Download 0.272 N/A N/A a.258.1 Description not found.
View Download 0.257 N/A N/A d.3.1 Cysteine proteinases
View Download 0.256 N/A N/A a.24.3 Cytochromes
View Download 0.224 N/A N/A d.224.1 SufE-like

Predicted Domain #2
Region A:
Residues: [144-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NLGGIVAPSS GVLAGIAEGA LYVWRDAEIV AAIAAAKEAG AAKGAAVGIK EGIKVLLNRL  60
   61 NTDFGLSPVR IKELESVING TNYTDVTFIY EAIYTTYKRS CVPVD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.577 a.24.19 Description not found.
View Download 0.542 a.24.22 Description not found.
View Download 0.480 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.464 a.24.10 Histidine-containing phosphotransfer domain, HPT domain
View Download 0.452 a.24.19 Description not found.
View Download 0.373 d.14.1 Ribosomal protein S5 domain 2-like
View Download 0.368 a.2.11 Fe,Mn superoxide dismutase (SOD), N-terminal domain
View Download 0.362 f.21.2 Fumarate reductase respiratory complex transmembrane subunits
View Download 0.362 f.21.2 Fumarate reductase respiratory complex transmembrane subunits

Predicted Domain #3
Region A:
Residues: [249-376]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSVRFTVADT DLTFCESVWN QTLAVSQRNM GTSPLPIIQK TAQKIVSDAN FTAAATAETA  60
   61 TEEATTTLTA KNTGEVNATY MGYQTPIIAS IVAILVIVLV MIIIYLILRY RRKKKMKKKL 120
  121 QYIKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle