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View Structure Prediction Details

Protein: gi|55700873, gi|...
Organism: Oryza sativa Japonica Group
Length: 335 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55700873, gi|....

Description E-value Query
Range
Subject
Range
gi|78499684 - gi|78499684|gb|ABB45838.1| hypothetical protein [Thellungiella halophila]
391.0 [0..1] [334..1]

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Predicted Domain #1
Region A:
Residues: [1-335]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCLLMLCLV SPLLLATSVH GNPWYGYGYG LFPQFYDHSC PKAKEIVQSI VAQAVARETR  60
   61 MAASLVRLHF HDCFVKGCDA SVLLDNSTTI ISEKGSNPNM NSLRGFEVVD EIKAALEAAC 120
  121 PGTVSCADIL ALAARDSTVL VGGPYWDVPL GRRDSLGASI QGSNNDIPAP NNTLPTIITK 180
  181 FKRQGLNIVD VVALSGGHTI GMSRCTSFRQ RLYNQSGNGM ADYTLDVSYA AQLRQGCPRS 240
  241 GGDNNLFPLD FVSPAKFDNF YFKNILSGKG LLSSDQVLLT KSAETAALVK AYADDVNLFF 300
  301 KHFAQSMVNM GNISPLTGSQ GEIRKNCRRL NNYYH

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.0
Match: 1pa2A
Description: Plant peroxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.426850936668086 bayes_pls_golite062009
oxidoreductase activity 0.10399831600382 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle