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View Structure Prediction Details

Protein: gi|14090211, gi|...
Organism: Oryza sativa Japonica Group
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|14090211, gi|....

Description E-value Query
Range
Subject
Range
gi|115488824, gi... - gi|77555930|gb|ABA98726.1| nodulin, putative, expressed [Oryza sativa (japonica cultivar-group)], gi...
186.0 [0..12] [374..3]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRDQAAAAV MHEKVKLFIG VLALQFLLAG FHIVSRAALN MGISKIVFIV YRNLISLALL  60
   61 APFAYFLEKK DRPPLTFSLL VEFFLLALCG ITANQGFYLL GLYHLSPTYA SAIQNTVPAI 120
  121 TFAMAAVLRL EQVDLGKRHG VAKVVGTVVS IGGATVITLY KGLPLFNHNL NIKSLSSSS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.468521
Match: PF00892.11
Description: No description for PF00892.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [180-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LILNWTLGCV FILGHCLSWS GWMVLQVPVL KRYPARLSVL SLTCIFGLLQ FLVIAAFTEE  60
   61 DLSRWKVNSG SELFTILYAG LVASGVAFAL QIWCIDRGGP LFTAVFQPVQ TVAVAVMAAI 120
  121 ILGDQLYSGG IIGAVLIVIG LYFVLWGKSE EKKSKNNNLQ DQPVQGGGDD IRRHLLGQED 180
  181 ASRKDEEAAV TDELA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.35
Match: 2i68A
Description: No description for 2i68A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle