YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|12515747, gi\|...
Organism:	Escherichia coli O157:H7 str. EDL933
Length:	87 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12515747, gi|....

Description	E-value	Query Range	Subject Range
gi\|75241394 - gi\|75241394\|ref\|ZP_00725245.1\| hypothetical protein EcolF_01001685 [Escherichia coli F11] gi\|26247983, gi\|... - gi\|26247983\|ref\|NP_754023.1\| cell division modulator [Escherichia coli CFT073], gi\|26108386\|gb\|AAN80... gi\|91072519, gi\|... - gi\|91210945\|ref\|YP_540931.1\| cell division modulator [Escherichia coli UTI89], gi\|91072519\|gb\|ABE074... gi\|218689672, gi... - gi\|218689672\|ref\|YP_002397884.1\| cell division modulator [Escherichia coli ED1a], gi\|218427236\|emb\|C... gi\|215486948, gi... - gi\|215486948\|ref\|YP_002329379.1\| cell division modulator [Escherichia coli O127:H6 str. E2348/69], g... gi\|227885846, gi... - gi\|227885846\|ref\|ZP_04003651.1\| cell division modulator [Escherichia coli 83972], gi\|227837419\|gb\|EE... gi\|117623903, gi... - gi\|117623903\|ref\|YP_852816.1\| cell division modulator [Escherichia coli APEC O1], gi\|115513027\|gb\|AB... gi\|226900437, gi... - gi\|237705680\|ref\|ZP_04536161.1\| cell division regulatory protein CedA [Escherichia sp. 3_2_53FAA], g...	160.0	[0..1]	[87..1]
gi\|254592749, gi... - gi\|254793349\|ref\|YP_003078186.1\| cell division modulator [Escherichia coli O157:H7 str. TW14359], gi... gi\|242377452, gi... - gi\|251785179\|ref\|YP_002999483.1\| hypothetical protein B21_01688 [Escherichia coli BL21], gi\|24237745... gi\|168749451, gi... - gi\|188016238\|gb\|EDU54360.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4113], gi\|... CEDA_ECOBW - Cell division activator CedA OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=cedA PE=3 SV=1 gi\|189356144, gi... - gi\|189356144\|gb\|EDU74563.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4401], gi\|... gi\|168762203, gi... - gi\|189367526\|gb\|EDU85942.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4501], gi\|... gi\|189360660, gi... - gi\|189360660\|gb\|EDU79079.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4486], gi\|... CEDA_ECO24 - Cell division activator CedA OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=cedA PE=3 SV=1 gi\|208724803, gi... - gi\|208810287\|ref\|ZP_03252163.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4206],... CEDA_ECOHS - Cell division activator CedA OS=Escherichia coli O9:H4 (strain HS) GN=cedA PE=3 SV=1 CEDA_SHIF8 - Cell division activator CedA OS=Shigella flexneri serotype 5b (strain 8401) GN=cedA PE=3 SV=2 gi\|208731021, gi... - gi\|208816678\|ref\|ZP_03257798.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4045],... gi\|24112871, gi\|... - ref\|NP_707381.1\| hypothetical protein SF1497 [Shigella flexneri 2a str. 301], gb\|AAN43088.1\| orf, c... gi\|194428537, gi... - gi\|75210218\|ref\|ZP_00710386.1\| hypothetical protein EcolB_01002632 [Escherichia coli B171], gi\|19442... gi\|208739154, gi... - gi\|208819031\|ref\|ZP_03259351.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4042],... gi\|192926558, gi... - gi\|75256133\|ref\|ZP_00727829.1\| hypothetical protein EcolE2_01003872 [Escherichia coli E22], gi\|19306... CEDA_ECO5E - Cell division activator CedA OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=cedA PE=3 SV=1 CEDA_ECOSE - Cell division activator CedA OS=Escherichia coli (strain SE11) GN=cedA PE=3 SV=1 gi\|217318206, gi... - gi\|217328859\|ref\|ZP_03444940.1\| cell division activator CedA [Escherichia coli O157:H7 str. TW14588]... EG13992 - cell division modulator / DNA-binding protein that modulates cell division; relieves inhibition of c... gi\|187769395, gi... - gi\|187769395\|gb\|EDU33239.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4196], gi\|... gi\|189000357, gi... - gi\|189000357\|gb\|EDU69343.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC4076], gi\|... gi\|168788129, gi... - gi\|189371957\|gb\|EDU90373.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC869], gi\|1... gi\|189377538, gi... - gi\|189377538\|gb\|EDU95954.1\| cell division activator CedA [Escherichia coli O157:H7 str. EC508], gi\|1... gi\|188490704, gi... - gi\|188495505\|ref\|ZP_03002775.1\| cell division activator CedA [Escherichia coli 53638], gi\|188490704\|... gi\|124499542, gi... - gi\|124529989\|ref\|ZP_01700801.1\| conserved hypothetical protein [Escherichia coli B], gi\|124499542\|gb... gi\|192957737, gi... - gi\|193068942\|ref\|ZP_03049901.1\| cell division activator CedA [Escherichia coli E110019], gi\|19295773... CEDA_SHIFL - Cell division activator CedA OS=Shigella flexneri GN=cedA PE=3 SV=2 gi\|194433502, gi... - gi\|194433502\|ref\|ZP_03065780.1\| cell division activator CedA [Shigella dysenteriae 1012], gi\|1944182... gi\|194438520, gi... - gi\|83586030\|ref\|ZP_00924668.1\| hypothetical protein Ecol1_01002765 [Escherichia coli 101-1], gi\|1944... CEDA_SHISS - Cell division activator CedA OS=Shigella sonnei (strain Ss046) GN=cedA PE=3 SV=2 gi\|195937415 - gi\|195937415\|ref\|ZP_03082797.1\| cell division modulator [Escherichia coli O157:H7 str. EC4024] CEDA_ECO57 - Cell division activator CedA OS=Escherichia coli O157:H7 GN=cedA PE=3 SV=2 gi\|148887351 - gi\|148887351\|sp\|P0AE60.2\|CEDA_ECOLI RecName: Full=Cell division activator cedA EG13992 - cell division modulator / DNA-binding protein that modulates cell division; relieves inhibition of c...	150.0	[0..8]	[87..1]
CEDA_ECOL5 - Cell division activator CedA OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=cedA PE=3 SV=1 CEDA_ECOUT - Cell division activator CedA OS=Escherichia coli (strain UTI89 / UPEC) GN=cedA PE=3 SV=2 CEDA_ECOL6 - Cell division activator CedA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=cedA ... CEDA_ECOL6 - Cell division activator CedA OS=Escherichia coli O6 GN=cedA PE=3 SV=2 gi\|190907955, gi... - gi\|191171625\|ref\|ZP_03033172.1\| cell division activator CedA [Escherichia coli F11], gi\|190907955\|gb... CEDA_ECOK1 - Cell division activator CedA OS=Escherichia coli O1:K1 / APEC GN=cedA PE=3 SV=2	150.0	[0..8]	[87..1]
gi\|214001289 - gi\|214001289\|ref\|ZP_03412024.1\| cell division modulator [Salmonella enterica subsp. enterica serovar... gi\|213981346 - gi\|213981346\|ref\|ZP_03408605.1\| cell division modulator [Salmonella enterica subsp. enterica serovar... gi\|213650301 - gi\|213650301\|ref\|ZP_03380354.1\| cell division modulator [Salmonella enterica subsp. enterica serovar... gi\|213622038 - gi\|213622038\|ref\|ZP_03374821.1\| cell division modulator [Salmonella enterica subsp. enterica serovar... CEDA_SALCH - Cell division activator CedA OS=Salmonella choleraesuis GN=cedA PE=3 SV=1 CEDA_SALPC - Cell division activator CedA OS=Salmonella paratyphi C (strain RKS4594) GN=cedA PE=3 SV=1 gi\|29137292, gi\|... - gi\|29141664\|ref\|NP_805006.1\| cell division modulator [Salmonella enterica subsp. enterica serovar Ty... gi\|16760575 - gi\|16760575\|ref\|NP_456192.1\| cell division modulator [Salmonella enterica subsp. enterica serovar Ty... CEDA_SALPA - Cell division activator CedA OS=Salmonella paratyphi A GN=cedA PE=3 SV=1 CEDA_SALTI - Cell division activator CedA OS=Salmonella typhi GN=cedA PE=3 SV=1 CEDA_SALTI - Cell division activator cedA OS=Salmonella typhi GN=cedA PE=3 SV=1 CEDA_SALCH - Cell division activator cedA OS=Salmonella choleraesuis GN=cedA PE=3 SV=1 lcl\|NC_016856.1_... - [gene=cedA] [protein=cell division modulator] [protein_id=YP_005237178.1] [location=1409707..1409949... CEDA_SALPA - Cell division activator CedA OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=cedA PE=3 SV=1 gi\|205329726, gi... - gi\|205329726\|gb\|EDZ16490.1\| cell division activator CedA [Salmonella enterica subsp. enterica serova... CEDA_SALCH - Cell division activator CedA OS=Salmonella choleraesuis (strain SC-B67) GN=cedA PE=3 SV=1 gi\|200390593, gi... - gi\|200390593\|ref\|ZP_03217204.1\| cell division activator CedA [Salmonella enterica subsp. enterica se... CEDA_SALDC - Cell division activator CedA OS=Salmonella dublin (strain CT_02021853) GN=cedA PE=3 SV=1 CEDA_SALPK - Cell division activator CedA OS=Salmonella paratyphi A (strain AKU_12601) GN=cedA PE=3 SV=1 gi\|197263110, gi... - gi\|197263110\|ref\|ZP_03163184.1\| cell division activator CedA [Salmonella enterica subsp. enterica se... gi\|213025791 - gi\|213025791\|ref\|ZP_03340238.1\| cell division modulator [Salmonella enterica subsp. enterica serovar... CEDA_SALEP - Cell division activator CedA OS=Salmonella enteritidis PT4 (strain P125109) GN=cedA PE=3 SV=1 CEDA_SALG2 - Cell division activator CedA OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=cedA PE=3 SV=1 gi\|204927725, gi... - gi\|204927725\|ref\|ZP_03218926.1\| cell division activator CedA [Salmonella enterica subsp. enterica se... gi\|205341573, gi... - gi\|205341573\|gb\|EDZ28337.1\| cell division activator CedA [Salmonella enterica subsp. enterica serova... gi\|205347548, gi... - gi\|205347548\|gb\|EDZ34179.1\| cell division activator CedA [Salmonella enterica subsp. enterica serova... gi\|168238990, gi... - gi\|197288244\|gb\|EDY27629.1\| cell division activator CedA [Salmonella enterica subsp. enterica serova... gi\|205332603, gi... - gi\|205332603\|gb\|EDZ19367.1\| cell division activator CedA [Salmonella enterica subsp. enterica serova... CEDA_SALSV - Cell division activator CedA OS=Salmonella schwarzengrund (strain CVM19633) GN=cedA PE=3 SV=1 gi\|194456472, gi... - gi\|194470108\|ref\|ZP_03076092.1\| cell division activator CedA [Salmonella enterica subsp. enterica se... CEDA_SALHS - Cell division activator CedA OS=Salmonella heidelberg (strain SL476) GN=cedA PE=3 SV=1 CEDA_SALNS - Cell division activator CedA OS=Salmonella newport (strain SL254) GN=cedA PE=3 SV=1	146.0	[0..8]	[87..1]
CEDA_SALTY - Cell division activator cedA OS=Salmonella typhimurium GN=cedA PE=3 SV=1 CEDA_SALTY - Cell division activator CedA OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=cedA... CEDA_SALTY - Cell division activator CedA OS=Salmonella typhimurium GN=cedA PE=3 SV=1	140.0	[0..8]	[87..1]

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Predicted Domain #1

Region A:
Residues: [1-87]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLVKPVMKK PLRQQNRQII SYVPRTEPAP PEHAIKMDSF RDVWMLRGKY VAFVLMGESF  60
   61 LRSPAFTVPE SAQRWANQIR QEGEVTE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.30103
Match:	2bn8A
Description:	No description for 2bn8A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits