| Protein: | gi|55741750 |
| Organism: | SPECIES UNKNOWN |
| Length: | 831 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55741750.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..831] | [122..952] |
|
|
0.0 | [1..831] | [129..959] |
|
|
0.0 | [1..831] | [90..922] |
|
|
0.0 | [1..831] | [5..835] |
|
|
0.0 | [1..831] | [1..834] |
|
|
0.0 | [1..831] | [1..833] |
|
|
0.0 | [336..831] | [16..511] |
|
|
3.0E-87 | [1..831] | [76..963] |
|
Region A: Residues: [1-400] |
1 11 21 31 41 51
| | | | | |
1 MKVHMHTKFC LICLLTFIFH HCNHCHEEHD HGPEALHRQH RGMTELEPSK FSKQAAENEK 60
61 KYYIEKLFER YGENGRLSFF GLEKLLTNLG LGERKVVEIN HEDLGHDHVS HLDILAVQEG 120
121 KHFHSHNHQH SHNHLNSENQ TVTSVSTKRN HKCDPEKETV EVSVKSDDKH MHDHNHRLRH 180
181 HHRLHHHLDH NNTHHFHNDS ITPSERGEPS NEPSTETNKT QEQSDVKLPK GKRKKKGRKS 240
241 NENSEVITPG FPPNHDQGEQ YEHNRVHKPD RVHNPGHSHV HLPERNGHDP GRGHQDLDPD 300
301 NEGELRHTRK REAPHVKNNA IISLRKDLNE DDHHHECLNV TQLLKYYGHG ANSPISTDLF 360
361 TYLCPALLYQ IDSRLCIEHF DKLLVEDINK DKNLVPEDEA
|
| Detection Method: |  |
| Confidence: | 2.03 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [401-640] |
1 11 21 31 41 51
| | | | | |
1 NIGASAWICG IISITVISLL SLLGVILVPI INQGCFKFLL TFLVALAVGT MSGDALLHLL 60
61 PHSQGGHDHS HQHAHGHGHS HGHESNKFLE EYDAVLKGLV ALGGIYLLFI IEHCIRMFKH 120
121 YKQQRGKQKW FMKQNTEEST IGRKLSDHKL NNTPDSDWLQ LKPLAGTDDS VVSEDRLNET 180
181 ELTDLEGQQE SPPKNYLCIE EEKIIDHSHS DGLHTIHEHD LHAAAHNHHG ENKTVLRKHN 240
241
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [641-831] |
1 11 21 31 41 51
| | | | | |
1 HQWHHKHSHH SHGPCHSGSD LKETGIANIA WMVIMGDGIH NFSDGLAIGA AFSAGLTGGI 60
61 STSIAVFCHE LPHELGDFAV LLKAGMTVKQ AIVYNLLSAM MAYIGMLIGT AVGQYANNIT 120
121 LWIFAVTAGM FLYVALVDML PEMLHGDGDN EEHGFCPVGQ FILQNLGLLF GFAIMLVIAL 180
181 YEDKIVFDIQ F
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
