| Protein: | gi|29140420, gi|... |
| Organism: | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 |
| Length: | 1099 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29140420, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..1099] | [1..1099] |
|
|
0.0 | [15..927] | [11..940] |
|
|
0.0 | [1..488] | [1..488] |
|
|
0.0 | [1..488] | [17..504] |
|
|
0.0 | [11..1092] | [8..1097] |
|
|
3.0E-89 | [12..1087] | [4..1097] |
|
|
6.0E-76 | [2..1097] | [4..1124] |
|
|
7.0E-71 | [16..1088] | [8..1111] |
|
|
3.0E-60 | [16..1088] | [8..1105] |
|
|
1.0E-41 | [12..625] | [25..641] |
|
Region A: Residues: [1-237] |
1 11 21 31 41 51
| | | | | |
1 MSQSEYASIL KCTPWLAKFL TRRGLKQPDH RPLYEYHATS EEYDELKRLL RAIGVPDGYK 60
61 SDKGYAACFT LFCSEWYRRD YEREYGWAWE PIYKTIGISA SSSKMGKIIP KGLDGYWGRP 120
121 VRFYDTERRN FLGSLFSEGG LPFRLLKESN SRFQSMFSLI LNQYDQAKSS NISTFALVHA 180
181 AVEKSSLPVV FKEDTSVELI SRMAEQLVSL VQIYDLSNHT EPVKELERVH PKWRDSF
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [238-488] |
1 11 21 31 41 51
| | | | | |
1 PVPLDDDTGT SFLNGLLRTA STESKPRLQK NKTTLCQFLW SENHPEALQA LISLPEELSF 60
61 SIDIEPSTTR FELAIYEDGN EIASLGPAYA TLSNSQAKIK VRKREIKFYR RNPTVSLFIV 120
121 ARAGGMFFGS NLLEGSEVAV GDVPLVFVSD KNEWLLQGQA SCSVRGSHVL IVLPKDGCLA 180
181 SEHEDCDSGF SALGCHALTI KGRQDIIIKG DETYRIKIGR DQIIHTGFSF QGKRLNWTSY 240
241 PDELFLGVPG I
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [489-635] |
1 11 21 31 41 51
| | | | | |
1 TQHSENLSTR HYKRFFNGTF IENCDVQEKM GAQFISVRNE NDETLLRKKI GILPNDFSLE 60
61 IKNGQQANEG SVIITTQHPC LYSLKEKTLE VGRKRLPDST EIMMKAEGIP PASISLQITP 120
121 NLTANPIVIW LPFPARGCLA FDKDEKP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.634 | d.188.1 | Prokaryotic ribosomal protein L17 |
| View | Download | 0.631 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.592 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.548 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.483 | d.95.2 | Homing endonucleases |
|
Region A: Residues: [636-750] |
1 11 21 31 41 51
| | | | | |
1 LPKNLTINDL LGARAYLFGK NGEPTRYQLE LRLRSRSGMQ AWYEWHYSAG ECPVELTLYS 60
61 LREHIDNLLS LEEGIDQTVD MRIKGGGSSF TWQIRRYKYS LDYDRGRQIL LANSI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [751-941] |
1 11 21 31 41 51
| | | | | |
1 SNRTGQIPSP VIMLLSEPER KVVLLTSRMS EGVPVGEFEL SSIIQKNGPW LVLPKPGEEA 60
61 SFRPCFIAGE PVIQSDATAI QSLQKATQLF NPRSDVNTIM LVLEQMASDP AHSGWQFLRN 120
121 LYDQFGYLPL ATFEVWRALV QHPQALAMSL FKFEMSIDYL SRIESEFPVF WEFLSITEVK 180
181 RSATRFRAFL T
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [942-1099] |
1 11 21 31 41 51
| | | | | |
1 HKGAPEEMQI RLLYRMYQQL GTTFPTYASE VQLWLSQGKL PPVFPELTMK GIILEWYQEL 60
61 LREHGESRWP EFGGPGLLRW YMSQQNPVID ISPDASYRYS VTLLPVFAAA VASGKTTFES 120
121 VFENKPGAVF FLRQVRDFDS RWFNAIFQYC LLRNVTEK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.876 | a.64.1 | Saposin |
| View | Download | 0.816 | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.807 | a.64.1 | Saposin |
| View | Download | 0.756 | a.64.1 | Saposin |
| View | Download | 0.742 | a.144.1 | PABC (PABP) domain |
