YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|29143327, gi\|...
Organism:	Salmonella enterica subsp. enterica serovar Typhi str. Ty2
Length:	194 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|29143327, gi|....

Description	E-value	Query Range	Subject Range
gi\|56129262, gi\|... - gi\|56415005\|ref\|YP_152080.1\| hypothetical protein SPA2927 [Salmonella enterica subsp. enterica serov... gi\|238909859 - gi\|238909859\|ref\|ZP_04653696.1\| hypothetical protein SentesTe_01815 [Salmonella enterica subsp. ente... gi\|62181570, gi\|... - gi\|62181570\|ref\|YP_217987.1\| hypothetical protein SC3000 [Salmonella enterica subsp. enterica serova... gi\|197363934, gi... - gi\|197363934\|ref\|YP_002143571.1\| hypothetical protein SSPA2729 [Salmonella enterica subsp. enterica ... gi\|16421610 - gi\|16421610\|gb\|AAL21934.1\| putative cytoplasmic protein [Salmonella enterica subsp. enterica serovar...	3.0E-79	[1..194]	[1..194]
gi\|161936216 - gi\|161936216\|ref\|YP_152080.2\| hypothetical protein SPA2927 [Salmonella enterica subsp. enterica sero... YGFB_SALTY - UPF0149 protein YgfB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) GN=ygfB PE=3 SV... YGFB_SALDC - UPF0149 protein YgfB OS=Salmonella dublin (strain CT_02021853) GN=ygfB PE=3 SV=1 gi\|200389239, gi... - gi\|200389239\|ref\|ZP_03215851.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Vir... gi\|204928410, gi... - gi\|204928410\|ref\|ZP_03219610.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Jav... YGFB_SALG2 - UPF0149 protein YgfB OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=ygfB PE=3 SV=1 gi\|194471320, gi... - gi\|194471320\|ref\|ZP_03077304.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Ken... YGFB_SALSV - UPF0149 protein YgfB OS=Salmonella schwarzengrund (strain CVM19633) GN=ygfB PE=3 SV=1 YGFB_SALA4 - UPF0149 protein YgfB OS=Salmonella agona (strain SL483) GN=ygfB PE=3 SV=1 gi\|197243460, gi... - gi\|197265205\|ref\|ZP_03165279.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Sai... gi\|205338191, gi... - gi\|205338191\|gb\|EDZ24955.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Heidelb... gi\|168463766, gi... - gi\|195633529\|gb\|EDX51943.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Newport... YGFB_SALNS - UPF0149 protein YgfB OS=Salmonella newport (strain SL254) GN=ygfB PE=3 SV=1 YGFB_SALHS - UPF0149 protein YgfB OS=Salmonella heidelberg (strain SL476) GN=ygfB PE=3 SV=1 gi\|162139550 - gi\|162139550\|ref\|YP_217987.2\| hypothetical protein SC3000 [Salmonella enterica subsp. enterica serov... gi\|205322278, gi... - gi\|205322278\|gb\|EDZ10117.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Saintpa... YGFB_SALTY - UPF0149 protein ygfB OS=Salmonella typhimurium GN=ygfB PE=3 SV=2 lcl\|NC_016856.1_... - [gene=ygfB] [protein=hypothetical protein] [protein_id=YP_005239199.1] [location=complement(3240121.... gi\|167990426, gi... - gi\|205331113\|gb\|EDZ17877.1\| YecA family protein [Salmonella enterica subsp. enterica serovar 4,[5],1... gi\|197290799, gi... - gi\|197290799\|gb\|EDY30153.1\| YecA family protein [Salmonella enterica subsp. enterica serovar Schwarz... YGFB_SALPC - UPF0149 protein YgfB OS=Salmonella paratyphi C (strain RKS4594) GN=ygfB PE=3 SV=1 gi\|205358817, gi... - gi\|205358817\|ref\|ZP_02659355.2\| YecA family protein [Salmonella enterica subsp. enterica serovar Ken... gi\|205359737, gi... - gi\|205359737\|ref\|ZP_02831916.2\| YecA family protein [Salmonella enterica subsp. enterica serovar Wel... gi\|205360782, gi... - gi\|205360782\|ref\|ZP_02686482.2\| YecA family protein [Salmonella enterica subsp. enterica serovar Had... YGFB_SALTY - UPF0149 protein ygfB OS=Salmonella typhimurium GN=ygfB PE=3 SV=2 YGFB_SALEP - UPF0149 protein YgfB OS=Salmonella enteritidis PT4 (strain P125109) GN=ygfB PE=3 SV=1	3.0E-78	[3..194]	[1..192]
gi\|213999422 - gi\|213999422\|ref\|ZP_03410157.1\| hypothetical protein Salmonellentericaenterica_01227 [Salmonella ent... Y3215_SALTI - UPF0149 protein YgfB OS=Salmonella typhi GN=ygfB PE=3 SV=2 gi\|161501921 - gi\|161501921\|ref\|NP_457457.2\| hypothetical protein STY3215 [Salmonella enterica subsp. enterica sero... gi\|213418754 - gi\|213418754\|ref\|ZP_03351820.1\| hypothetical protein Salmonentericaenterica_13214 [Salmonella enteri... gi\|213583280 - gi\|213583280\|ref\|ZP_03365106.1\| hypothetical protein SentesTyph_19568 [Salmonella enterica subsp. en... gi\|213609656 - gi\|213609656\|ref\|ZP_03369482.1\| hypothetical protein SentesTyp_03635 [Salmonella enterica subsp. ent... gi\|161486786 - gi\|161486786\|ref\|NP_806669.2\| hypothetical protein t2977 [Salmonella enterica subsp. enterica serova... Y3215_SALTI, YW1... - (Q8Z3W5) Hypothetical UPF0149 protein ygfB, UPF0149 protein ygfB OS=Salmonella typhi GN=ygfB PE=3 SV...	1.0E-77	[3..194]	[1..192]
gi\|81242474, gi\|... - gi\|82778326\|ref\|YP_404675.1\| hypothetical protein SDY_3172 [Shigella dysenteriae Sd197], gi\|81242474...	3.0E-75	[1..194]	[1..194]
gi\|74313467, gi\|... - gi\|74313467\|ref\|YP_311886.1\| hypothetical protein SSON_3062 [Shigella sonnei Ss046], gi\|73856944\|gb\|... gi\|81246880, gi\|... - gi\|82545469\|ref\|YP_409416.1\| hypothetical protein SBO_3083 [Shigella boydii Sb227], gi\|81246880\|gb\|A... gi\|13363252 - gi\|13363252\|dbj\|BAB37203.1\| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi\|91212288, gi\|... - gi\|91212288\|ref\|YP_542274.1\| hypothetical protein UTI89_C3295 [Escherichia coli UTI89], gi\|91073862\|... gi\|110643057, gi... - gi\|110643057\|ref\|YP_670787.1\| hypothetical protein ECP_2902 [Escherichia coli 536], gi\|110344649\|gb\|... gi\|110806811, gi... - gi\|110806811\|ref\|YP_690331.1\| hypothetical protein SFV_2957 [Shigella flexneri 5 str. 8401], gi\|1106... gi\|115514263, gi... - gi\|117625139\|ref\|YP_854127.1\| hypothetical protein APECO1_3619 [Escherichia coli APEC O1], gi\|115514... gi\|13363252 - gi\|13363252\|dbj\|BAB37203.1\| hypothetical protein [Escherichia coli O157:H7] gi\|194436761, gi... - gi\|194436761\|ref\|ZP_03068861.1\| YecA family protein [Escherichia coli 101-1], gi\|194424243\|gb\|EDX402... gi\|24114162, gi\|... - ref\|NP_708672.1\| hypothetical protein SF2895 [Shigella flexneri 2a str. 301], gb\|AAN44379.1\| orf, c... gi\|124526185, gi... - gi\|124526185\|ref\|ZP_01698190.1\| yecA family protein [Escherichia coli B], gi\|124502289\|gb\|EAY49749.1... gi\|194419947, gi... - gi\|194431591\|ref\|ZP_03063882.1\| YecA family protein [Shigella dysenteriae 1012], gi\|194419947\|gb\|EDX... gi\|26249326, gi\|... - gi\|26249326\|ref\|NP_755366.1\| hypothetical protein c3491 [Escherichia coli CFT073], gi\|26109734\|gb\|AA... gi\|193063488, gi... - gi\|193063488\|ref\|ZP_03044577.1\| YecA family protein [Escherichia coli E22], gi\|192930765\|gb\|EDV83370... gi\|1789276, gi\|4... - gi\|49176281\|ref\|NP_417385.3\| hypothetical protein b2909 [Escherichia coli K12], gb\|AAC75947.1\| orf, ... gi\|170681497, gi... - gi\|170681497\|ref\|YP_001745063.1\| YecA family protein [Escherichia coli SMS-3-5], gi\|170519215\|gb\|ACB... gi\|12517439, gi\|... - gi\|15803444\|ref\|NP_289477.1\| hypothetical protein Z4246 [Escherichia coli O157:H7 EDL933], gi\|125174... gi\|237706444, gi... - gi\|237706444\|ref\|ZP_04536925.1\| conserved hypothetical protein [Escherichia sp. 3_2_53FAA], gi\|22689... gi\|227888459, gi... - gi\|227888459\|ref\|ZP_04006264.1\| YecA family protein [Escherichia coli 83972], gi\|227834728\|gb\|EEJ451... gi\|254037955, gi... - gi\|254037955\|ref\|ZP_04872013.1\| YecA family protein [Escherichia sp. 1_1_43], gi\|226839579\|gb\|EEH716... gi\|253323294, gi... - gi\|253772250\|ref\|YP_003035081.1\| yecA family protein [Escherichia coli BL21(DE3)], gi\|253323294\|gb\|A... gi\|170018845, gi... - gi\|170018845\|ref\|YP_001723799.1\| yecA family protein [Escherichia coli ATCC 8739], gi\|169753773\|gb\|A... gi\|168800045, gi... - gi\|189377638\|gb\|EDU96054.1\| YecA family protein [Escherichia coli O157:H7 str. EC508], gi\|168800045\|... gi\|882439\|gb\|AAA... - ORF_f194 gi\|209760438, gi... - gi\|882439\|gb\|AAA69077.1\| ORF_f194, pir\|\|A47020 hypothetical 21.5K protein (pepP-ssr intergenic regio...	4.0E-75	[1..194]	[1..194]
YGFB_SHIFL - UPF0149 protein YgfB OS=Shigella flexneri GN=ygfB PE=3 SV=1 gi\|30042477, gi\|... - gi\|30064220\|ref\|NP_838391.1\| hypothetical protein S3094 [Shigella flexneri 2a str. 2457T], gi\|300424... sp\|B7UHV7\|YGFB_ECO27 - UPF0149 protein ygfB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ygfB PE=3 SV=1 gi\|229560213 - gi\|229560213\|ref\|YP_670787.2\| hypothetical protein ECP_2902 [Escherichia coli 536] gi\|229597232 - gi\|229597232\|ref\|YP_001723799.2\| hypothetical protein EcolC_0800 [Escherichia coli ATCC 8739] gi\|229775961 - gi\|229775961\|ref\|YP_854127.2\| hypothetical protein APECO1_3619 [Escherichia coli APEC O1] YGFB_ECOBW - UPF0149 protein YgfB OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=ygfB PE=3 SV=1 gi\|242378440, gi... - gi\|251786167\|ref\|YP_003000471.1\| hypothetical protein B21_02704 [Escherichia coli BL21], gi\|24237844... YGFB_ECOLI - UPF0149 protein ygfB - Escherichia coli gi\|253974722, gi... - gi\|254162821\|ref\|YP_003045929.1\| hypothetical protein ECB_02741 [Escherichia coli B str. REL606], gi... gi\|254289581, gi... - gi\|254289581\|ref\|YP_003055329.1\| hypothetical protein ECD_02741 [Escherichia coli BL21(DE3)], gi\|253... gi\|254594258, gi... - gi\|254794858\|ref\|YP_003079695.1\| hypothetical protein ECSP_3876 [Escherichia coli O157:H7 str. TW143... gi\|168753850, gi... - gi\|189358458\|gb\|EDU76877.1\| YecA family protein [Escherichia coli O157:H7 str. EC4401], gi\|168753850... gi\|162139720 - gi\|162139720\|ref\|NP_311807.3\| hypothetical protein ECs3780 [Escherichia coli O157:H7 str. Sakai] gi\|187776139, gi... - gi\|187776139\|ref\|ZP_02800796.2\| YecA family protein [Escherichia coli O157:H7 str. EC4196], gi\|18776... YGFB_ECODH - UPF0149 protein YgfB OS=Escherichia coli (strain K12 / DH10B) GN=ygfB PE=3 SV=1 gi\|189009923, gi... - gi\|189009923\|ref\|ZP_02803932.2\| YecA family protein [Escherichia coli O157:H7 str. EC4076], gi\|18900... gi\|188024616, gi... - gi\|188024616\|ref\|ZP_02772631.2\| YecA family protein [Escherichia coli O157:H7 str. EC4113], gi\|18801... gi\|189404741, gi... - gi\|189404741\|ref\|ZP_02810765.2\| YecA family protein [Escherichia coli O157:H7 str. EC869], gi\|189373... gi\|189403774, gi... - gi\|189403774\|ref\|ZP_02785047.2\| YecA family protein [Escherichia coli O157:H7 str. EC4501], gi\|18936... YGFB_ECOL6 - UPF0149 protein YgfB OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ygfB PE=3 SV=... gi\|161367534 - gi\|161367534\|ref\|NP_289477.2\| hypothetical protein Z4246 [Escherichia coli O157:H7 EDL933] gi\|161986458 - gi\|161986458\|ref\|YP_311886.2\| hypothetical protein SSON_3062 [Shigella sonnei Ss046] gi\|161984859 - gi\|161984859\|ref\|YP_409416.2\| hypothetical protein SBO_3083 [Shigella boydii Sb227] YGFB_ECO8A - UPF0149 protein YgfB OS=Escherichia coli O8 (strain IAI1) GN=ygfB PE=3 SV=1 YGFB_ESCF3 - UPF0149 protein YgfB OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=ygfB... YGFB_ECO81 - UPF0149 protein YgfB OS=Escherichia coli O81 (strain ED1a) GN=ygfB PE=3 SV=1 YGFB_ECO45 - UPF0149 protein YgfB OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ygfB PE=3 SV=1 YGFB_ECO7I - UPF0149 protein YgfB OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=ygfB PE=3 SV=1 YGFB_ECO55 - UPF0149 protein YgfB OS=Escherichia coli (strain 55989 / EAEC) GN=ygfB PE=3 SV=1 YGFB_ECOLU - UPF0149 protein YgfB OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ygfB PE=3 SV=1 gi\|208807052, gi... - gi\|208807052\|ref\|ZP_03249389.1\| YecA family protein [Escherichia coli O157:H7 str. EC4206], gi\|20872... gi\|195936527 - gi\|195936527\|ref\|ZP_03081909.1\| hypothetical protein EscherichcoliO157_08697 [Escherichia coli O157:... gi\|208821067, gi... - gi\|208821067\|ref\|ZP_03261387.1\| YecA family protein [Escherichia coli O157:H7 str. EC4042], gi\|20874... gi\|208813371, gi... - gi\|208813371\|ref\|ZP_03254700.1\| YecA family protein [Escherichia coli O157:H7 str. EC4045], gi\|20873... YGFB_ECOSE - UPF0149 protein YgfB OS=Escherichia coli (strain SE11) GN=ygfB PE=3 SV=1 YGFB_ECO5E - UPF0149 protein YgfB OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ygfB PE=3 SV=1 gi\|217320115, gi... - gi\|217327748\|ref\|ZP_03443831.1\| YecA family protein [Escherichia coli O157:H7 str. TW14588], gi\|2173... YGFB_ECO27 - UPF0149 protein YgfB OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ygfB PE=3 SV=1 YGFB_ECO57 - UPF0149 protein YgfB OS=Escherichia coli O157:H7 GN=ygfB PE=3 SV=1 YGFB_ECOL6 - UPF0149 protein ygfB OS=Escherichia coli O6 GN=ygfB PE=3 SV=1 gi\|75258509 - gi\|75258509\|ref\|ZP_00729931.1\| COG3079: Uncharacterized protein conserved in bacteria [Escherichia c... EG11323 - UPF0149 family protein / UPF0149 family protein, function unknown gi\|85675721, gi\|... - gi\|89109688\|ref\|AP_003468.1\| hypothetical protein [Escherichia coli str. K-12 substr. W3110], gi\|856... gi\|56480198, gi\|... - gi\|56480198\|ref\|NP_708672.2\| hypothetical protein SF2895 [Shigella flexneri 2a str. 301], gi\|5638374... gi\|83587695 - gi\|83587695\|ref\|ZP_00926322.1\| COG3079: Uncharacterized protein conserved in bacteria [Escherichia c... YGFB_SHIB3 - UPF0149 protein YgfB OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ygfB PE=3 SV=1 YGFB_ECO24 - UPF0149 protein YgfB OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ygfB PE=3 SV=1 YGFB_ECOHS - UPF0149 protein YgfB OS=Escherichia coli O9:H4 (strain HS) GN=ygfB PE=3 SV=1 gi\|194426366, gi... - gi\|75212476\|ref\|ZP_00712500.1\| COG3079: Uncharacterized protein conserved in bacteria [Escherichia c... gi\|75227227 - gi\|75227227\|ref\|ZP_00714027.1\| COG3079: Uncharacterized protein conserved in bacteria [Escherichia c... gi\|75234637 - gi\|75234637\|ref\|ZP_00718968.1\| COG3079: Uncharacterized protein conserved in bacteria [Escherichia c... gi\|75239252 - gi\|75239252\|ref\|ZP_00723225.1\| COG3079: Uncharacterized protein conserved in bacteria [Escherichia c... EG11323 - UPF0149 family protein / UPF0149 family protein, function unknown	3.0E-74	[3..194]	[1..192]
gi\|38704125 - gi\|38704125\|ref\|NP_311807.2\| hypothetical protein ECs3780 [Escherichia coli O157:H7] gi\|38704125 - gi\|38704125\|ref\|NP_311807.2\| hypothetical protein ECs3780 [Escherichia coli O157:H7 str. Sakai] gi\|33347708\|ref\|... - hypothetical protein b2909 [Escherichia coli K12], hypothetical protein b2909 [Escherichia coli K12]	2.0E-70	[9..194]	[1..186]
Y3186_YERPS - UPF0149 protein YPTB3186 OS=Yersinia pseudotuberculosis GN=YPTB3186 PE=3 SV=1 gi\|165937277, gi... - gi\|89104316\|ref\|ZP_01176862.1\| COG3079: Uncharacterized protein conserved in bacteria [Yersinia pest... Y356_YERPA - UPF0149 protein YPA_0356 OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=YPA_0356 PE=3 SV=1 Y3110_YERPN - UPF0149 protein YPN_3110 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=YPN_3110 PE=3 SV=1 gi\|229837599, gi... - gi\|229837599\|ref\|ZP_04457761.1\| hypothetical protein YPS_1523 [Yersinia pestis Pestoides A], gi\|2297... gi\|229697189, gi... - gi\|229840823\|ref\|ZP_04460982.1\| hypothetical protein YPH_3172 [Yersinia pestis biovar Orientalis str... gi\|229690928, gi... - gi\|229842618\|ref\|ZP_04462773.1\| hypothetical protein YPF_0961 [Yersinia pestis biovar Orientalis str... gi\|167050614, gi... - gi\|167399906\|ref\|ZP_02305424.1\| YecA family protein [Yersinia pestis biovar Antiqua str. UG05-0454],... Y3826_YERPG - UPF0149 protein YpAngola_A3826 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=YpAngola_A3826 PE=3... gi\|166212655, gi... - gi\|166212655\|ref\|ZP_02238690.1\| YecA family protein [Yersinia pestis biovar Antiqua str. B42003004],... Y859_YERP3 - UPF0149 protein YpsIP31758_0859 OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=Yp... gi\|167055813, gi... - gi\|167425413\|ref\|ZP_02317166.1\| YecA family protein [Yersinia pestis biovar Mediaevalis str. K197300... gi\|166962674, gi... - gi\|167418680\|ref\|ZP_02310433.1\| YecA family protein [Yersinia pestis biovar Orientalis str. MG05-102... Y862_YERPY - UPF0149 protein YPK_0862 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=YPK_0862 PE=3... gi\|167467671 - gi\|167467671\|ref\|ZP_02332375.1\| YecA family protein [Yersinia pestis FV-1] Y3318_YERPB - UPF0149 protein YPTS_3318 OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=YPTS_3318 PE=... gi\|150260079, gi... - gi\|150260079\|ref\|ZP_01916807.1\| putative exported protein [Yersinia pestis CA88-4125], gi\|149289487\|... Y603_YERPP - UPF0149 protein YPDSF_0603 OS=Yersinia pestis (strain Pestoides F) GN=YPDSF_0603 PE=3 SV=1 gi\|166010271, gi... - gi\|166010271\|ref\|ZP_02231169.1\| YecA family protein [Yersinia pestis biovar Antiqua str. E1979001], ... gi\|165923252, gi... - gi\|165925052\|ref\|ZP_02220884.1\| YecA family protein [Yersinia pestis biovar Orientalis str. F1991016... Y911_YERPE - UPF0149 protein YPO0911/y3298/YP_3608 OS=Yersinia pestis GN=YPO0911 PE=3 SV=1 gi\|45438211, gi\|... - gi\|45443342\|ref\|NP_994881.1\| hypothetical protein YP_3608 [Yersinia pestis biovar Microtus str. 9100... gi\|22127174, gi\|... - gi\|22127174\|ref\|NP_670597.1\| hypothetical protein y3298 [Yersinia pestis KIM], gi\|21960238\|gb\|AAM868... gi\|218928084, gi... - gi\|218928084\|ref\|YP_002345959.1\| hypothetical protein YPO0911 [Yersinia pestis CO92], gi\|16121216\|re... Y3186_YERPS - UPF0149 protein YPTB3186 OS=Yersinia pseudotuberculosis serotype I (strain IP32953) GN=YPTB3186 PE=3...	6.0E-70	[3..194]	[1..192]
gi\|238725453, gi... - gi\|77978891\|ref\|ZP_00834314.1\| COG3079: Uncharacterized protein conserved in bacteria [Yersinia inte...	7.0E-70	[3..194]	[1..192]
gi\|77974492, gi\|... - gi\|77974492\|ref\|ZP_00830032.1\| COG3079: Uncharacterized protein conserved in bacteria [Yersinia fred...	2.0E-69	[3..194]	[1..192]

Back

Predicted Domain #1

Region A:
Residues: [1-194]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMSIQNEMP GYDEMNRFLN QQGAGLTPAE MHGLISGMIC GGNNDSSWQP LLHDLTNEGL  60
   61 AFGHELAQAL RKMHAATSDA LEDDGFLFQL YLPEGDDVSV FDRADALAGW VNHFLLGLGV 120
  121 TQPKLDKVTG ETGEAIDDLR NIAQLGYDES EDQEELEMSL EEIIEYVRVA ALLCHDTFTR 180
  181 QQPTAPEVRK PTLH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	54.0
Match:	1izmA
Description:	Structure of ygfB from Haemophilus influenzae (HI0817), a Conserved Hypothetical Protein
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits