YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|16503049, gi\|...
Organism:	Salmonella enterica subsp. enterica serovar Typhi
Length:	659 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16503049, gi|....

Description	E-value	Query Range	Subject Range
gi\|37677141, gi\|... - gi\|37677141\|ref\|NP_937537.1\| alkyl sulfatase [Vibrio vulnificus YJ016], gi\|37201686\|dbj\|BAC97507.1\| ...	0.0	[1..659]	[1..655]
gi\|56413216, gi\|... - gi\|56413216\|ref\|YP_150291.1\| putative hydrolase [Salmonella enterica subsp. enterica serovar Paratyp... gi\|197362141, gi... - gi\|197362141\|ref\|YP_002141778.1\| putative hydrolase [Salmonella enterica subsp. enterica serovar Par...	0.0	[1..659]	[1..659]
gi\|27358953, gi\|... - gi\|27367384\|ref\|NP_762911.1\| Alkyl sulfatase [Vibrio vulnificus CMCP6], gi\|27358953\|gb\|AAO07901.1\|AE...	0.0	[7..659]	[1..653]
gi\|62128070, gi\|... - gi\|62180437\|ref\|YP_216854.1\| putative hydrolase [Salmonella enterica subsp. enterica serovar Cholera...	0.0	[1..658]	[1..658]
gi\|94314321, gi\|... - gi\|94314321\|ref\|YP_587530.1\| beta-lactamase-like protein [Ralstonia metallidurans CH34], gi\|93358173...	0.0	[2..659]	[3..660]
gi\|82403753, gi\|... - gi\|82498241\|ref\|ZP_00883749.1\| alkyl sulfatase [Shewanella sp. MR-4], gi\|82403753\|gb\|EAP44466.1\| alk...	0.0	[6..659]	[3..651]
gi\|78689803, gi\|... - gi\|78689803\|ref\|ZP_00854460.1\| alkyl sulfatase [Shewanella sp. MR-7], gi\|78510832\|gb\|EAP24197.1\| alk...	0.0	[6..659]	[3..651]
RPA1010 - RPA1010 Beta-lactamase-like:ATP/GTP-binding site motif A (P-loop) 1111734:1113680 reverse MW:71553	0.0	[27..659]	[11..642]
gi\|116221590, gi... - gi\|75820936\|ref\|ZP_00750973.1\| COG2015: Alkyl sulfatase and related hydrolases [Vibrio cholerae V51]...	0.0	[3..659]	[1..657]

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Predicted Domain #1

Region A:
Residues: [1-659]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLKSIVKSF ALAGLLSSTA LTPLFAQEAP KGATASTKQA NNALYNQLPF SDNTDFTNAH  60
   61 KGFIADLPAE VIKGEQGNVI WNPQQYAFIK EGEKSPDTVN PSLWRQSQLI NISGLFEVTD 120
  121 GVYQIRNLDL SNMTIIEGKE GITVVDPLVS AETAKAGMDL YFKNRGNKPV VAIIYTHSHV 180
  181 DHYGGVRGVV DEADVKSGKV KVYAPAGFME AAVAENIMAG NVMSRRASYM YGNLLKPDAS 240
  241 GQVGAGLGTT TSAGTVTLIA PTNIIDKDGQ KEVIDGLTYD FMLAPGSEAP SEMLWFIEEK 300
  301 KLIEAAEDVT HTLHNTYSLR GAKIREPLPW SKYINEAIVR WGDKAEIIMA QHHWPTWGNE 360
  361 NVVGLLKSQR DLYRYINDQT LRMANEGLTR DEIAANFKLP DSLAKTWANR GYYGSISHDV 420
  421 KATYVLYLGW FDGNPATLDE LPPEEAAKKF VEYMGGADAI LQKAKADFDQ GNYRWVAQVV 480
  481 SKVVFADPNN QNARNLEADA LEQLGYQAES GPWRNFYLTG AQELRNGVVK GPTPNTASPD 540
  541 TVRAMTPEMF FDFLAVHING EKAGNARAVF NIDLGSDGGK YKLELENGVL NHTANAEAKD 600
  601 ADATITLNRD TLNKIILKEE TLKQAQDKGE VNVTGNAAKL DEMLGYMDKF EFWFNIVTP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	152.0
Match:	2cfuA
Description:	No description for 2cfuA was found.

Predicted functions:

Term	Confidence	Notes
alkyl sulfatase activity	1.69609271133145	bayes_pls_golite062009
hydroxyacylglutathione hydrolase activity	1.565406918731	bayes_pls_golite062009
catalytic activity	0.941400907161877	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: