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View Structure Prediction Details

Protein: GID1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GID1_ORYSJ.

Description E-value Query
Range
Subject
Range
GID1C_ARATH - Gibberellin receptor GID1C OS=Arabidopsis thaliana GN=GID1C PE=1 SV=1
222.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGSDEVNRN ECKTVVPLHT WVLISNFKLS YNILRRADGT FERDLGEYLD RRVPANARPL  60
   61 EGVSSFDHII DQSVGLEVRI YRAAAEGDAE EGAAAVTRPI LEFLTDAPAA EPFPVIIFFH 120
  121 GGSFVHSSAS STIYDSLCRR FVKLSKGVVV SVNYRRAPEH RYPCAYDDGW TALKWVMSQP 180
  181 FMRSGGDAQA RVFLSGDSSG GNIAHHVAVR AADEGVKVCG NILLNAMFGG TERTESERRL 240
  241 DGKYFVTLQD RDWYWKAYLP EDADRDHPAC NPFGPNGRRL GGLPFAKSLI IVSGLDLTCD 300
  301 RQLAYADALR EDGHHVKVVQ CENATVGFYL LPNTVHYHEV MEEISDFLNA NLYY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.69897
Match: 1evqA
Description: Carboxylesterase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle