| Protein: | RWA3_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 540 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RWA3_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
799.0 | [0..1] | [538..1] |
|
Region A: Residues: [1-194] |
1 11 21 31 41 51
| | | | | |
1 MADSQPITPG QVSFLLGVIP VFIAWIYSEF LEYKRSSLHS KVHSDNNLVE LGEVKNKEDE 60
61 GVVLLEGGLP RSVSTKFYNS PIKTNLIRFL TLEDSFLIEN RATLRAMAEF GAILFYFYIS 120
121 DRTSLLGESK KNYNRDLFLF LYCLLIIVSA MTSLKKHNDK SPITGKSILY LNRHQTEEWK 180
181 GWMQVLFLMY HYFA
|
| Detection Method: |  |
| Confidence: | 0.985 |
| Match: | 1u5eA |
| Description: | Crystal Structure of a N-terminal Fragment of SKAP-Hom Containing Both the Helical Dimerization Domain and the PH Domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.46923761062082 | bayes_pls_golite062009 |
| protein binding | 0.127111860178639 | bayes_pls_golite062009 |
|
Region A: Residues: [195-398] |
1 11 21 31 41 51
| | | | | |
1 AAEIYNAIRV FIAAYVWMTG FGNFSYYYIR KDFSLARFTQ MMWRLNLFVA FSCIILNNDY 60
61 MLYYICPMHT LFTLMVYGAL GIFSRYNEIP SVMALKIASC FLVVIVMWEI PGVFEIFWSP 120
121 LTFLLGYTDP AKPELPLLHE WHFRSGLDRY IWIIGMIYAY FHPTVERWME KLEECDAKRK 180
181 MSIKTSIIAI SSFVGYLWYE YIYK
|
| Detection Method: | |
| Confidence: | 70.167491 |
| Match: | PF07779.3 |
| Description: | No description for PF07779.3 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [399-459] |
1 11 21 31 41 51
| | | | | |
1 LDKVTYNKYH PYTSWIPITV YICLRNSTQQ LRNFSMTLFA WLGKITLETY ISQFHIWLRS 60
61 N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [460-540] |
1 11 21 31 41 51
| | | | | |
1 VPNGQPKWLL CIIPEYPMLN FMLVTAIYVL VSHRLFELTN TLKSVFIPTK DDKRLLHNVL 60
61 AGAAISFCLY LTSLILLQIP H
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
