YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|25356476
Organism:	Lactococcus lactis subsp. lactis
Length:	175 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25356476.

Description	E-value	Query Range	Subject Range
gi\|25356485 - pir\|\|A98071 conserved hypothetical protein spr1595 [imported] - Streptococcus pneumoniae (strain R6) gi\|15903637, gi\|... - gi\|15903637\|ref\|NP_359187.1\| hypothetical protein spr1595 [Streptococcus pneumoniae R6], gi\|15459262...	149.0	[0..1]	[175..22]
gi\|148989412, gi... - gi\|148989412\|ref\|ZP_01820780.1\| hypothetical protein CGSSp6BS73_07939 [Streptococcus pneumoniae SP6-... gi\|237649162 - gi\|237649162\|ref\|ZP_04523414.1\| hypothetical protein SpneC1_00150 [Streptococcus pneumoniae CCRI 197... gi\|147923482, gi... - gi\|148984193\|ref\|ZP_01817488.1\| hypothetical protein CGSSp3BS71_03192 [Streptococcus pneumoniae SP3-... gi\|237820722 - gi\|237820722\|ref\|ZP_04596567.1\| hypothetical protein SpneC19_00050 [Streptococcus pneumoniae CCRI 19... gi\|168486389, gi... - gi\|183570589\|gb\|EDT91117.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumoniae C... gi\|168483289, gi... - gi\|172043178\|gb\|EDT51224.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumoniae C... gi\|168491367, gi... - gi\|183574235\|gb\|EDT94763.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumoniae C... gi\|183572691, gi... - gi\|183572691\|gb\|EDT93219.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumoniae S... gi\|149020833, gi... - gi\|149020833\|ref\|ZP_01835362.1\| hypothetical protein CGSSp23BS72_02309 [Streptococcus pneumoniae SP2... gi\|149011380, gi... - gi\|149011380\|ref\|ZP_01832627.1\| hypothetical protein CGSSp19BS75_08217 [Streptococcus pneumoniae SP1... gi\|147761880, gi... - gi\|149006582\|ref\|ZP_01830281.1\| hypothetical protein CGSSp18BS74_02296 [Streptococcus pneumoniae SP1... gi\|147759865, gi... - gi\|149002056\|ref\|ZP_01827010.1\| hypothetical protein CGSSp14BS69_10106 [Streptococcus pneumoniae SP1... gi\|148997806, gi... - gi\|148997806\|ref\|ZP_01825370.1\| hypothetical protein CGSSp11BS70_02824 [Streptococcus pneumoniae SP1... gi\|25356481 - pir\|\|A95204 conserved hypothetical protein SP1750 [imported] - Streptococcus pneumoniae (strain TIGR... gi\|183578701, gi... - gi\|183578701\|gb\|EDT99229.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumoniae M... gi\|66877182, gi\|... - gi\|66877182\|ref\|ZP_00402814.1\| COG2179: Predicted hydrolase of the HAD superfamily [Streptococcus pn... gi\|183576377, gi... - gi\|183576377\|gb\|EDT96905.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumoniae C... gi\|194358303, gi... - gi\|194398636\|ref\|YP_002038360.1\| had-superfamily hydrolase (subfamily IIIa) phosphatase [Streptococc... gi\|168996020, gi... - gi\|169833518\|ref\|YP_001695125.1\| HAD family phosphatase [Streptococcus pneumoniae Hungary19A-6], gi\|... gi\|225855181, gi... - gi\|225855181\|ref\|YP_002736693.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumon... gi\|221232485, gi... - gi\|221232485\|ref\|YP_002511638.1\| putative hydrolase [Streptococcus pneumoniae ATCC 700669], gi\|22067... gi\|225857362, gi... - gi\|225857362\|ref\|YP_002738873.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumon... gi\|225859502, gi... - gi\|225859502\|ref\|YP_002741012.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumon... gi\|225727376, gi... - gi\|225861572\|ref\|YP_002743081.1\| had superfamily (subfamily iiia) phosphatase [Streptococcus pneumon...	148.0	[0..1]	[175..1]
gi\|116517207, gi... - gi\|116517207\|ref\|YP_817013.1\| hypothetical protein SPD_1560 [Streptococcus pneumoniae D39], gi\|11607...	147.0	[0..1]	[175..1]
gi\|25356478 - pir\|\|B83815 hypothetical protein BH1322 [imported] - Bacillus halodurans (strain C-125) gi\|10173938, gi\|... - gi\|15613885\|ref\|NP_242188.1\| hypothetical protein BH1322 [Bacillus halodurans C-125], gi\|10173938\|db...	147.0	[0..3]	[173..2]
gi\|29377340, gi\|... - gi\|29377340\|ref\|NP_816494.1\| HAD superfamily hydrolase [Enterococcus faecalis V583], gi\|29344807\|gb\|... gi\|227554297, gi... - gi\|227554297\|ref\|ZP_03984344.1\| HAD superfamily hydrolase [Enterococcus faecalis HH22], gi\|227176587... gi\|229544803, gi... - gi\|229544803\|ref\|ZP_04433528.1\| HAD superfamily hydrolase [Enterococcus faecalis TX1332], gi\|2293100... gi\|227519402, gi... - gi\|227519402\|ref\|ZP_03949451.1\| HAD superfamily hydrolase [Enterococcus faecalis TX0104], gi\|2270731... gi\|229549018, gi... - gi\|229549018\|ref\|ZP_04437743.1\| HAD superfamily hydrolase [Enterococcus faecalis ATCC 29200], gi\|229... gi\|238858487, gi... - gi\|238858487\|ref\|ZP_04648702.1\| had superfamily phosphatase [Enterococcus faecalis TUSoD Ef11], gi\|2...	147.0	[0..4]	[175..3]
gi\|94541398, gi\|... - gi\|94987890\|ref\|YP_595991.1\| putative lipase [Streptococcus pyogenes MGAS9429], gi\|94541398\|gb\|ABF31... gi\|94547158, gi\|... - gi\|94993650\|ref\|YP_601748.1\| Putative lipase [Streptococcus pyogenes MGAS10750], gi\|94547158\|gb\|ABF3... gi\|28896549, gi\|... - gi\|28896549\|ref\|NP_802899.1\| hypothetical protein SPs1637 [Streptococcus pyogenes SSI-1], gi\|2881180... gi\|15674472, gi\|... - gi\|15674472\|ref\|NP_268646.1\| hypothetical protein SPy_0305 [Streptococcus pyogenes M1 GAS], gi\|13621... gi\|19747539, gi\|... - gi\|19747539\|gb\|AAL97062.1\| conserved hypothetical protein [Streptococcus pyogenes MGAS8232], gi\|1974... gi\|71902918, gi\|... - gi\|71902918\|ref\|YP_279721.1\| putative lipase [Streptococcus pyogenes MGAS6180], gi\|71802013\|gb\|AAX71... gi\|209558819, gi... - gi\|209558819\|ref\|YP_002285291.1\| hypothetical protein Spy49_0257 [Streptococcus pyogenes NZ131], gi\|... gi\|21903944, gi\|... - gi\|21909759\|ref\|NP_664027.1\| hypothetical protein SpyM3_0223 [Streptococcus pyogenes MGAS315], gi\|21... gi\|71910074, gi\|... - gi\|71910074\|ref\|YP_281624.1\| putative lipase [Streptococcus pyogenes MGAS5005], gi\|71852856\|gb\|AAZ50... gi\|94991775, gi\|... - gi\|94991775\|ref\|YP_599874.1\| putative lipase [Streptococcus pyogenes MGAS2096], gi\|94545283\|gb\|ABF35... gi\|56807735 - gi\|56807735\|ref\|ZP_00365601.1\| COG2179: Predicted hydrolase of the HAD superfamily [Streptococcus py...	146.0	[0..1]	[175..20]
gi\|24380166, gi\|... - gi\|24380166\|ref\|NP_722121.1\| hypothetical protein SMU.1802c [Streptococcus mutans UA159], gi\|2437816...	146.0	[0..1]	[175..1]
gi\|50913634, gi\|... - gi\|50913634\|ref\|YP_059606.1\| putative lipase [Streptococcus pyogenes MGAS10394], gi\|50902708\|gb\|AAT8...	146.0	[0..1]	[175..20]
gi\|94543274, gi\|... - gi\|94989766\|ref\|YP_597866.1\| putative lipase [Streptococcus pyogenes MGAS10270], gi\|94543274\|gb\|ABF3...	146.0	[0..1]	[175..20]
gi\|89100815, gi\|... - gi\|89100815\|ref\|ZP_01173667.1\| hypothetical protein B14911_06713 [Bacillus sp. NRRL B-14911], gi\|890...	145.0	[0..3]	[173..11]

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Predicted Domain #1

Region A:
Residues: [1-175]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIDNYKPDY LVEAVYQLDP KRLQALNVRA VMVDLDNTLI AWDNPDGTPE LLAWLLDMRE  60
   61 NGLKVVVVSN NKQARVARAV EKFGVQYIWR AMKPFAWGIK KALRLLDERP ENVIMVGDQL 120
  121 MTDIRAAHRA GVRSILVKPL VASDSWSTQV NRWRERRVWK KLIARDGEPV WKTSL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.154902
Match:	2hoqA
Description:	No description for 2hoqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits