YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|12724622, gi\|...
Organism:	Lactococcus lactis subsp. lactis Il1403
Length:	180 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|12724622, gi|....

Description	E-value	Query Range	Subject Range
gi\|116108080, gi... - gi\|116512426\|ref\|YP_809642.1\| spermidine acetyltransferase [Lactococcus lactis subsp. cremoris SK11]...	155.0	[0..1]	[179..1]
gi\|52784100, gi\|... - gi\|52784100\|ref\|YP_089929.1\| YnaD [Bacillus licheniformis ATCC 14580], gi\|52346602\|gb\|AAU39236.1\| Yn...	148.0	[0..1]	[172..1]
YP20_BACLI - Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1	147.0	[0..1]	[172..1]
gi\|42736945, gi\|... - gi\|42781024\|ref\|NP_978271.1\| acetyltransferase [Bacillus cereus ATCC 10987], gi\|42736945\|gb\|AAS40879...	147.0	[0..1]	[170..1]
gi\|167040456, gi... - gi\|167040456\|ref\|YP_001663441.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X514], gi\|... gi\|255339225, gi... - gi\|255339225\|ref\|ZP_05380065.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter mathranii subsp... gi\|242256373, gi... - gi\|242256373\|ref\|ZP_04801265.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X513], gi\|2...	145.0	[0..2]	[173..6]
gi\|228656344, gi... - gi\|229127228\|ref\|ZP_04256225.1\| Acetyltransferase, GNAT [Bacillus cereus BDRD-Cer4], gi\|228656344\|gb... gi\|30019941, gi\|... - gi\|30019941\|ref\|NP_831572.1\| ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579...	145.0	[0..1]	[170..1]
gi\|47557582, gi\|... - gi\|47565592\|ref\|ZP_00236633.1\| acetyltransferase, GNAT family, putative [Bacillus cereus G9241], gi\|...	145.0	[0..1]	[169..1]
gi\|228945523, gi... - gi\|228945523\|ref\|ZP_04107873.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar monterrey BG... gi\|228661923, gi... - gi\|229121459\|ref\|ZP_04250686.1\| Acetyltransferase, GNAT [Bacillus cereus 95/8201], gi\|228661923\|gb\|E... gi\|229602949, gi... - gi\|229602949\|ref\|YP_002866288.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0248], gi\|... gi\|254684474 - gi\|254684474\|ref\|ZP_05148334.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. CNEV... gi\|254724001 - gi\|254724001\|ref\|ZP_05185787.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. A105... gi\|254734777 - gi\|254734777\|ref\|ZP_05192489.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. West... gi\|254741179 - gi\|254741179\|ref\|ZP_05198867.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Krug... gi\|254755430 - gi\|254755430\|ref\|ZP_05207464.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Voll... gi\|190562568, gi... - gi\|190566433\|ref\|ZP_03019351.1\| acetyltransferase, GNAT family [Bacillus anthracis Tsiankovskii-I], ... gi\|254759967 - gi\|254759967\|ref\|ZP_05211991.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Aust... gi\|172083703, gi... - gi\|177650559\|ref\|ZP_02933526.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0174], gi\|1... gi\|196041179, gi... - gi\|196041179\|ref\|ZP_03108474.1\| acetyltransferase, GNAT family [Bacillus cereus NVH0597-99], gi\|1960... gi\|196033308, gi... - gi\|196033308\|ref\|ZP_03100720.1\| acetyltransferase, GNAT family [Bacillus cereus W], gi\|195993742\|gb\|... gi\|218903028, gi... - gi\|218903028\|ref\|YP_002450862.1\| acetyltransferase, GNAT family [Bacillus cereus AH820], gi\|21853799... gi\|47502316, gi\|... - gi\|47527168\|ref\|YP_018517.1\| acetyltransferase [Bacillus anthracis str. 'Ames Ancestor'], gi\|4750231... gi\|30256541, gi\|... - gi\|30261915\|ref\|NP_844292.1\| acetyltransferase [Bacillus anthracis str. Ames], gi\|30256541\|gb\|AAP257... gi\|21399752, gi\|... - gi\|65319192\|ref\|ZP_00392151.1\| COG1670: Acetyltransferases, including N-acetylases of ribosomal prot... gi\|49477413, gi\|... - gi\|49477413\|ref\|YP_036046.1\| ribosomal-protein-alanine acetyltransferase [Bacillus thuringiensis ser... gi\|49184750, gi\|... - gi\|49184750\|ref\|YP_028002.1\| acetyltransferase [Bacillus anthracis str. Sterne], gi\|49178677\|gb\|AAT5... gi\|165869474, gi... - gi\|165869474\|ref\|ZP_02214133.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0488], gi\|1... gi\|167638846, gi... - gi\|167638846\|ref\|ZP_02397121.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0193], gi\|1... gi\|167633179, gi... - gi\|167633179\|ref\|ZP_02391504.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0442], gi\|1... gi\|170707241, gi... - gi\|170707241\|ref\|ZP_02897696.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0389], gi\|1... gi\|170686257, gi... - gi\|170686257\|ref\|ZP_02877479.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0465], gi\|1... gi\|227006534, gi... - gi\|227815306\|ref\|YP_002815315.1\| acetyltransferase, GNAT family [Bacillus anthracis str. CDC 684], g... gi\|228914503, gi... - gi\|228914503\|ref\|ZP_04078112.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar pulsiensis B... gi\|228832707, gi... - gi\|228926972\|ref\|ZP_04090038.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar pondicherien... gi\|228933204, gi... - gi\|228933204\|ref\|ZP_04096060.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar andalousiens...	145.0	[0..1]	[170..1]
gi\|20516549, gi\|... - gi\|20807976\|ref\|NP_623147.1\| acetyltransferase [Thermoanaerobacter tengcongensis MB4], gi\|20516549\|g... gi\|20807976 - gi\|20807976\|ref\|NP_623147.1\| Acetyltransferase, including N-acetylase of ribosomal proteins [Thermoa...	145.0	[0..2]	[178..4]
gi\|51977015, gi\|... - gi\|52143546\|ref\|YP_083283.1\| ribosomal-protein-alanine acetyltransferase [Bacillus cereus E33L], gi\|...	144.0	[0..1]	[170..1]

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Predicted Domain #1

Region A:
Residues: [1-180]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLTNEPTM KIRALERTDL KNIHIINNKA ETMRLWFEEP YESLDELTSL YDKHIHDNTE  60
   61 RRFVIEANDT FIGIVELMSI DYIHRTCEIQ IIIISGFSGK GYAQKALKTG VDYAFNTLNM 120
  121 HKVYLWVDID NAPAVHIYKK LGFKIEGTIK EQFFAGGRYH DSYFMGILKS EYTQREKAVK 180
  181

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.69897
Match:	1nslA
Description:	Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits